Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2630 ATGCTTTCTCTCCAATTCACCATCCACCATCTTCCTCCACCTCAATTCCTCACCACCACCACCAACATTTCTTCCTTCTCTCCCATCTCACTCTCCTTCTTCAACAACCACCACCTTCTTCGCTACAATGTCAAAACCCTAAAAAACCACAGAATTCTAGCAATGTCTACTAATAATAAGTCTACATTCAAAATGAATCTCAACGAGTATCTCGTCACTCTCGAAAAACCACTCGGAATTCGATTCGCTCTTACATCCGATGGAAAAATTATTATCCACTCTCTCGCTAAAGGCGGTAATGCTGAAAAGTCTAGGATAATTATGGTGGGTGATACTTTGAAGAAAGCTGGTGATTCGTCGCGGAATAGTCTTGTTGAGATTAAAGATGTTGGAGATACACAGAAGGTGCTAAAGGAGCAAACAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCTGCATCTACATTTCCCATTCAACTACTGCATAATAAGATGAATGATCTTGAAATAGTGTATAATAGAGGCCGAGTTCCTTTTGTCACATGGAACAAGACACTATTAGCATCAAATTTACAACCATCTAGTGAGAGCGGTGGGAGTTCTGGATTTTCGACGTTCAACTCAAAGTTTCTTAACTCAAATGGAAGCAAGTTATTGGGCAATCAAAATCAACATGCCATCACCCATGGTGAAAGAAATTCATTTACTGAACAAACGATACAACTTGCTTGTGTTTTCTCTGAAGAAGCATGTGGAGATGGAGATTGGGCTCACGGAAGTTTTCCACTTGAAGAATATATTAAGGCTCTAGATCGTTCCAAGGATGAGATGTACTATAATCACTCTCTTGGTATGCGTTATAGTAAGATTACCGAGCAAATATATGTGGGATCTTGTATACAAACAGAGGAAGATGTGGAAACCTTGTCAAAAGTTGAGGGAGTTACTGCTGTTCTGAACTTCCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGTAAAATCGATCAATGATGCTTGTCAAAGGAATAATATTCTCATCATCAACTACCCTATACGGGATGGAGATTCTTATGACATGAGAAAAAAACTCCCATTTTGTGTTGGGCTTTTATTACGGTTGCTAAGAAAGAATCTCCGTGTTTTTGTTACTTGCACTTCTGGATTTGATAGGTCTCCTGCTTGTGTGATTGCATATCTACATTGGATGACAGACGTTTCCCTTCATGCAGCTTATACTTGGGTCACTGGGATGCACACGTGCAGGCCTGACAGGCCGGCAATTGCATGGGCGACATGGGATCTTATAGCTATGGTTGAAAGGGGCGAACATGATGGTCCTCCTACACATGCTGTAACATTTGTATGGAATGGTCATGAGGGAGAGGATGTAAATTTGGTTGGAGACTTTACTGGAAATTGGAAAGAACCAGTTAAGGCAAAGCATCGGGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTATTACTACAAGTTCATTGTTAATGGACAATGGAAGCATTCAACATCTTCACCAGCTGAAAGGGATGATAGCGGAAATGTTAACAATATAATCATGATTGGTGAAACTGCCAGCGTTCGGCCTTCTGTTCAGCACCAGCAAAGAGATGCCAACGTTGTAAAGGTGATCGAAAGACCTTTGAATGAAAAAGAGCGGTTTATGTTGGCGAAAGCTGCTCGTTGTATTGCTTTCTCCATCTGTCCTGTCAGATTAGCTCCTAAATAG 1758 0.4084 MLSLQFTIHHLPPPQFLTTTTNISSFSPISLSFFNNHHLLRYNVKTLKNHRILAMSTNNKSTFKMNLNEYLVTLEKPLGIRFALTSDGKIIIHSLAKGGNAEKSRIIMVGDTLKKAGDSSRNSLVEIKDVGDTQKVLKEQTSSFSLVLERPASTFPIQLLHNKMNDLEIVYNRGRVPFVTWNKTLLASNLQPSSESGGSSGFSTFNSKFLNSNGSKLLGNQNQHAITHGERNSFTEQTIQLACVFSEEACGDGDWAHGSFPLEEYIKALDRSKDEMYYNHSLGMRYSKITEQIYVGSCIQTEEDVETLSKVEGVTAVLNFQSGTEAENWGINVKSINDACQRNNILIINYPIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVERGEHDGPPTHAVTFVWNGHEGEDVNLVGDFTGNWKEPVKAKHRGGSRHEVEVKLPQGKYYYKFIVNGQWKHSTSSPAERDDSGNVNNIIMIGETASVRPSVQHQQRDANVVKVIERPLNEKERFMLAKAARCIAFSICPVRLAPK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2630 585 Gene3D Protein tyrosine phosphatase superfamily 278 544 IPR029021 -
Tpr6g2630 585 CDD DSP_laforin-like 284 430 IPR045204 GO:0019203|GO:0046838
Tpr6g2630 585 Pfam Dual specificity phosphatase, catalytic domain 294 415 IPR000340 GO:0008138|GO:0016311
Tpr6g2630 585 Gene3D Immunoglobulins 439 535 IPR013783 -
Tpr6g2630 585 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 36 585 IPR030066 GO:0005983
Tpr6g2630 585 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 275 418 IPR029021 -
Tpr6g2630 585 CDD E_set_AMPKbeta_like_N 452 531 - -
Tpr6g2630 585 SUPERFAMILY PDZ domain-like 74 159 IPR036034 GO:0005515
Tpr6g2630 585 SUPERFAMILY E set domains 449 532 IPR014756 -
Tpr6g2630 585 Pfam Glycogen recognition site of AMP-activated protein kinase 452 533 IPR032640 -
Tpr6g2630 585 ProSiteProfiles PDZ domain profile. 71 152 IPR001478 GO:0005515
Tpr6g2630 585 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 36 585 - -
Tpr6g2630 585 ProSiteProfiles Dual specificity protein phosphatase domain profile. 285 444 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2630 136 585 Protein tyrosine phosphatase (PTP) family AT3G01510 68.444 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2630 - - gmx:100814503 995.342