Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2623 ATGGCTATAAGATATTGTTACAAAGATTTGGTTCCTTTTGGTGCTATGGTTACCATGGAATGCATCAACGTTGCCTTGAATACTCTCTTCAAAGCTGCTACCTTAAAAGGAATGAGTTATCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTTCTTCCTTCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCTCTGAGTAAACCCATAATGTACAAAATTGGTCTTCTTGGGGTGATCGGAAGTTCATCTCAGATTATGGGGTATACAGGTATTAGTTTAAGTTCTCCCACTCTCTCTTCAGCAATTAGCAACTTGGTTCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGATGGAAAAGGTAGCTATAAGAAATTTAAGTAGTCAAGCAAAGGTGTTGGGAACCATAGTCTCAATATCAGGAGCATTTATAGTGACCCTCTACATAGGACCACCAATCATCATTGCACTCAGATCTTCCCTTCCACTTCATCAATCAATTAACACTCCAAAACCATCAGATCAAAATTGGGCCATTGGTGGCCTTTTATTGACAGCTGAGTATATTTTGGTTCCCTTATGGTACATTGTACAGGTACAAATCATGAAGGTGTACCCTGATGAACTAACAGTAATCTTCTATTACAACTTATGTGTAAGCATTATAGCTGCAATTGTAGGGGTGATTAGTGAGCCAAATGCAAGTGCTTGGAAAATAGGACTCGATACATCACTTGCATCCATCCTTTGCTCGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTACTACGTATAAAGGGGGCCGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATAGCTGTTGCAATGGGAGTTGTGTTCCTTGGTGATACTCTCCACCTTGGAAGTTTAATTGGAGCAACAATAATATCAATTGGATTTTATACTGTAATGTGGGGTAAAGTAACAGAAGAGGTGATTGAAGATGTCCCTATCCACGAAACACCAACTACACAAAATGTTCCTCTCTTGCAAGGCTATAAAACTGAAGTTGAAAACAAGATGCATACAAGTGTATAA 1098 0.3871 MAIRYCYKDLVPFGAMVTMECINVALNTLFKAATLKGMSYHVFVVYAYAVAAFVLLPSPFISKRSRVLPPLSKPIMYKIGLLGVIGSSSQIMGYTGISLSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIRNLSSQAKVLGTIVSISGAFIVTLYIGPPIIIALRSSLPLHQSINTPKPSDQNWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDELTVIFYYNLCVSIIAAIVGVISEPNASAWKIGLDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSLIGATIISIGFYTVMWGKVTEEVIEDVPIHETPTTQNVPLLQGYKTEVENKMHTSV* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2623 365 PANTHER WAT1-RELATED PROTEIN 9 348 - -
Tpr6g2623 365 Pfam EamA-like transporter family 201 324 IPR000620 GO:0016020|GO:0016021
Tpr6g2623 365 PANTHER WAT1-RELATED PROTEIN 9 348 IPR030184 GO:0016021|GO:0022857
Tpr6g2623 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2623 Tpr-Chr6 28686364 28690956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2623 1 356 Nodulin-like Gene Family AT3G28050 57.182 1.01e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2623 - - gmx:100801438 541.962