Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2621 ATGACTCCTCATATGTTGTTATGTTACCTTACAACATTGTTTCACTTGATTTTCATCACATTAGCTCAAACTGATAACTATATCATTTTCATGAACATATCAGTCATGCCTAAACCATTCTTAACACAACACACATGGTACATTTCCACTCTTTCCTCTGCTTTAGAGAACCCTCAACTCATTTCTTCCAAGTTAATTTACACCTACACACATGTCATCAATGGTTTCAGTGTTAACCTTTCTCCAAAAGAACATCAAGCTTTGACAAATTCACCCGGATACATTTCATCCGTAAAAGATTTACAGATGAAACTAGACACTACATATTCCCCTCAATTCCTTGGTCTCAATCCCAAAGTAGGTGCTTGGCCTGATTCAGAATTTGGTAAAGGTATAGTTATTGGTTTGGTTGACACCGGAATTTGGCCAGAGAGTAAAAGCTTCAGAGATAACAAAATGTCCAATATTCCTTCAAAATGGAAAGGACACTGTGAAGATAGCATTCACTTCAATTCATCCCTCTGTAACAAAAAACTCATCGGAGCTAAATTCTTCAACAGAGGATTATTAGCACAGGATCCCAATGCAACCTTAGGTTTAAACTCCACACGTGACACAGTAGGTCACGGAACCCACACTTCGTCAACAGCAGCCGGAAGCAGAGTTGATAATGCATCTTTCTTTGGTTATGCAGCTGGAACAGCTTCAGGAGTTGCTCCGAATTCGCATGTCGCAATGTATAAGGTTGTATGGAAAGATGAATTAGTTTCATCTGATGTAATAGCTGCAATTGATGCTGCAATATCAGACGATGTTGATATTCTTTCATTATCATTTGGGTCTACAGAATTTGTACCTTTGTATGAAGATCCACTAGCCATAGCAACATTTGCAGCTATGAAAAAAGGTGTTTTTGTCTCGTGTGCAGCTGGAAATGGCGGTCCTGACCTTGAAACTCTTCACAATGGAATGCCTTGGGTGATAACTTCTGCCGCTGGTACTATGGATAGAGATTTTCAAGGGATTCTTACACTTGGAAATGGTAACAAAGTCATGGGATTTTCTGTTTATGTAGGAACATTTTCTTCACATAATGTTCCGATTGTTTTCATGGGTTTATGTGACAATGTTAACGAACTGAAAAAAGTGAAGAGAATGATTGTGGTTTGTGAAGACAAGAATGGAACTAGCCTTTCTTATCAACCTGGTAATTTGGGTGAAGTAAACGTTTATGGAGCTGTTTTGATTTCAAATACCGCCGACACATACTATTCATCGGATGATTACACTATCGGTTTCCAGAATAGTTTGGCAGCCATCTTTGTTGATCCAATACATGGGGAAATCATCAAAGCCTACATCAAGAGTTATTACAACTCTAATCACTCTTCGATAGCAAGCATGTCTTTTAGGAAAACAGGTTTTGGTCTGAAAACAGCACCTAGTGTTGATTCTTACAGCTCAAGAGGGCCATCGTATAGCTGTCCATTTGTGTTGAAACCAGATATTACTGCACCCGGTACTTCGATCTTAGCGGCATGGCCTTCAAATGTCACGGTGGCACAAAAATATTTTAGAGATTTCAATTTGGATAGTGGAACATCTATGGCATGTCCTCATGTTGCTGGTGTCGCAGCGCTTGTGAAAGGCACACACCGTAATTGGAGCCCTGCGGCTATTCGGTCAGCAATAATGACAACATCGGACATATTGGATAATAATCAGGAACACATCAAAGACATTGGAACTGGAAGCAGGGCAACCCCTTTTGCATTGGGAGCTGGGCATGTTAATCCAAAGAGAGCACTTAACCCAGGACTTGTTTATGATGTTGGTGTACAAGATTATGTGAATCTTCTTTGTGCACTAAACATCACACAGAAAAACATCACAGCCATTACAAGATCCTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTTAACTACCCTTCTTTTATTGCATTTTTCAATGGTGAAAATTCTTCGTCAAAGACAATACAAGAATTTTATAGAACAGTTACCAATGTTGGCGAGGGACAAGCAACTTATGTTGCTAGCATTACTCCAATTGAAGGGTTTCGCGCCACTGTGATCCCAAACAACTTGGTGTTCAATGAGAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGTTGCAGCAACTACAAAATTAAAGGAATTGGATTTTGGATATCTAACTTGGATGGATACGAAGCAGCATGTTGTTAGGAGTCCAATTGTGGTCACAACCCTCAAATTGAAATCCTAG 2274 0.3949 MTPHMLLCYLTTLFHLIFITLAQTDNYIIFMNISVMPKPFLTQHTWYISTLSSALENPQLISSKLIYTYTHVINGFSVNLSPKEHQALTNSPGYISSVKDLQMKLDTTYSPQFLGLNPKVGAWPDSEFGKGIVIGLVDTGIWPESKSFRDNKMSNIPSKWKGHCEDSIHFNSSLCNKKLIGAKFFNRGLLAQDPNATLGLNSTRDTVGHGTHTSSTAAGSRVDNASFFGYAAGTASGVAPNSHVAMYKVVWKDELVSSDVIAAIDAAISDDVDILSLSFGSTEFVPLYEDPLAIATFAAMKKGVFVSCAAGNGGPDLETLHNGMPWVITSAAGTMDRDFQGILTLGNGNKVMGFSVYVGTFSSHNVPIVFMGLCDNVNELKKVKRMIVVCEDKNGTSLSYQPGNLGEVNVYGAVLISNTADTYYSSDDYTIGFQNSLAAIFVDPIHGEIIKAYIKSYYNSNHSSIASMSFRKTGFGLKTAPSVDSYSSRGPSYSCPFVLKPDITAPGTSILAAWPSNVTVAQKYFRDFNLDSGTSMACPHVAGVAALVKGTHRNWSPAAIRSAIMTTSDILDNNQEHIKDIGTGSRATPFALGAGHVNPKRALNPGLVYDVGVQDYVNLLCALNITQKNITAITRSSSNDCSKPSLDLNYPSFIAFFNGENSSSKTIQEFYRTVTNVGEGQATYVASITPIEGFRATVIPNNLVFNEKNEKLSYKLRIEVAATTKLKELDFGYLTWMDTKQHVVRSPIVVTTLKLKS* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2621 757 Gene3D - 336 475 - -
Tpr6g2621 757 Pfam Peptidase inhibitor I9 27 105 IPR010259 -
Tpr6g2621 757 Gene3D Peptidase S8/S53 domain 131 616 IPR036852 GO:0004252|GO:0006508
Tpr6g2621 757 CDD Peptidases_S8_3 104 569 IPR034197 -
Tpr6g2621 757 Pfam Subtilase family 129 572 IPR000209 GO:0006508|GO:0008236
Tpr6g2621 757 ProSiteProfiles Serine proteases, subtilase domain profile. 108 603 - -
Tpr6g2621 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Tpr6g2621 757 PANTHER PUTATIVE-RELATED 17 754 - -
Tpr6g2621 757 SUPERFAMILY Subtilisin-like 105 607 IPR036852 GO:0004252|GO:0006508
Tpr6g2621 757 Gene3D - 620 753 - -
Tpr6g2621 757 CDD PA_subtilisin_like 343 462 - -
Tpr6g2621 757 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Tpr6g2621 757 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Tpr6g2621 757 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Tpr6g2621 757 Pfam Fibronectin type-III domain 647 750 IPR041469 -
Tpr6g2621 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Tpr6g2621 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 754 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2621 Tpr-Chr6 28666084 28669169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2621 5 757 Subtilisin-like Serine Gene Family AT5G67090 45.232 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2621 - - gmx:100786751 942.954