Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2602 ATGAAGATGGCACCTCAATACCTAACAATCATGATCATTTTTCTCTCTATCTCTTCATGTCTTGCAAGAGTCGAGCCAAAACCATCTTTGGCTCGACATAAGTCCCAAATAACCCCAAACCAAACAAAAACTGAAATTGAAACCCAAGCCCAAACTCGCAACAAAACAATGGCATACATAGAGTCCTCGTGCCAAGGAACACGATACCCAGATCTATGCATGCGGTCCTTAGCCTCGTTCGCCAAATACTCCACCGTAGTTGGACCTGACCACTTAGCCCACATAGCCCTATCTGTAAGCCTCGTCAAAGCACTTCAAACAAGAGGTTACTTATTAAAGGTAGTAAAAGAAATTGAAGAAATCAACAAGGGTAGCGAGCCAGGTCTTGCATACTTAACTATGCAAGATTGTGAGAAACAAATCAGCGATAGCGTTGATCAACTTAGCCAAGCAATTAAAGAGCTTCGTCGGGTGAACAAAGGTACAATTATTGATGATAAAATGTTGTGGCATATAAGTAACGTCGAGACATGGGTGAGCACTGCTTTAACCGATGCTAGCTATTGTGTGCAATCGTTTCCCGGTCATAGGATGAGTAAGAGGACTGCTACTATAAAGAGTAAGGCACAAAATGTTGCTGAGGTTACTAGTAATGGTCTTGCTTTGTTCCACAAGTATGCTGCTAGGTACAAAGCAGCAGCAGCTGCTAGAGCTGCCAAGAGACCATAA 729 0.428 MKMAPQYLTIMIIFLSISSCLARVEPKPSLARHKSQITPNQTKTEIETQAQTRNKTMAYIESSCQGTRYPDLCMRSLASFAKYSTVVGPDHLAHIALSVSLVKALQTRGYLLKVVKEIEEINKGSEPGLAYLTMQDCEKQISDSVDQLSQAIKELRRVNKGTIIDDKMLWHISNVETWVSTALTDASYCVQSFPGHRMSKRTATIKSKAQNVAEVTSNGLALFHKYAARYKAAAAARAAKRP* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2602 242 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 226 IPR006501 GO:0004857
Tpr6g2602 242 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 225 IPR035513 -
Tpr6g2602 242 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 226 IPR035513 -
Tpr6g2602 242 PANTHER BNAANNG18590D PROTEIN 47 230 - -
Tpr6g2602 242 Coils Coil 134 154 - -
Tpr6g2602 242 Pfam Plant invertase/pectin methylesterase inhibitor 59 222 IPR006501 GO:0004857
Tpr6g2602 242 PANTHER PECTINESTERASE INHIBITOR-LIKE 47 230 - -
Tpr6g2602 242 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Tpr6g2602 242 SMART PMEI_2 55 222 IPR006501 GO:0004857
Tpr6g2602 242 CDD PMEI-like_3 62 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2602 Tpr-Chr6 28461193 28462126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2602 13 223 Carbohydrate Esterase AT3G49220 25.701 1.47e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2602 - - cam:101507576 311.997