Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2544 ATGCACCATGATTTCTCCCCTCTGATTGTTCATCGAGATATATCAAGCAAGAATATTCTTCTGGATTTAGAATATGTGGCTCGTGTCTCCGACTTTGGAACAGCTAAGCTTCTTAATCCTAATTCATCAAATTGGACCTCTTTTGCAGGCACCTTTGGATATGTTGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAAAATGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGATATTGTATCTAATTCTTTACAATGGATTATCATGGGATCAACACTTGATACTATGCCATTGATGAATAAGTTGGATCAACGTCTCTCTCGTCCGGTGAATCGTCGACAAGCTAAGGAGTTAGTATCTATTGCAAAGACAACAATTTCTTGTTTGGTTGATATTCAACAATCTCGCCCTACAATGGAACAGGTTTCTAGGGAACTTTTAAGTGTGTAG 483 0.3789 MHHDFSPLIVHRDISSKNILLDLEYVARVSDFGTAKLLNPNSSNWTSFAGTFGYVAPELAYTMEVNEKNDVYSFGVLALEILFGKHPGDIVSNSLQWIIMGSTLDTMPLMNKLDQRLSRPVNRRQAKELVSIAKTTISCLVDIQQSRPTMEQVSRELLSV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2544 160 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 158 - -
Tpr6g2544 160 Pfam Protein kinase domain 6 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2544 160 SUPERFAMILY Protein kinase-like (PK-like) 1 157 IPR011009 -
Tpr6g2544 160 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Tpr6g2544 160 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2544 160 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 158 - -
Tpr6g2544 160 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2544 Tpr-Chr6 27776298 27776980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2544 1 160 Receptor kinase-like Gene Family AT5G65700 40.719 1.62e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g2544 Pkinase 7.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2544 - - mtr:MTR_7g446190 220.32