Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2532 ATGATTCACACACATGTTCAAACTTCAAATTATTTTCTTTCTCAAAAAACCATCATCACAAAAAATAAAACCATGCAACTTCATAATCTTTGCATTGTTTTACCACAAAATTCAGGTGAACTAATGAAACAACAAGAACCTCAAAAAAGTTTCAAACAAAAATCTTTTAAATCTTCAAAGAAACAAAAATTTAAGTCCAAAAGTTCTTCTTCAAGAGCTTGTGGTGGAGGACAACAAGTTCTTGATTTGCTTCATGATTCATTAAGCAAGTTATGTAACTCAAAATGGTTGGTGGGTGCAAAAAGAATTTGTAAAAATGGTGGGGTGCAAAAAGAAAAAAAGGAAAATTCTACTATGTTTCATGACATGGATGGTGTACAATTTGGTGTAAAGATTGGAAGAGACAATCCAAGAATTTTCAGCTATGCAGAACTTTTCATAGGGTCTAATGGTTTCAATGAAGAACAAGTTTTAGGAAGTGGTGGATTTGGAAAAGTTTACAAAGCTCTTTTGCCAAGTGATGGAACTTTAGTAGCTGTGAAATGTTGTTTATCAGAAAAAGGTAAACAATTTGACAAGAGTTTCTTAGCCGAATTATCGGCTGTGGCTGATCTTCGACATAAGAATCTTGTTAGGTTAAGAGGTTGGTGTGTTCATGAAGATCAATTACATCTTGTTTATGATTACATGCCGAATCGAAGCCTTGATCGTGTACTCTTCCGAAAGCCGGGGAATTTGAAAGGTGAGCAGCCTCTTGGTTGGAGACAAAGAGAAAAAATTGTTAAAGGTTTGTCTGCTGCATTGTATTATTTACATGAACAATTAGAGACTCAAATCATTCATAGAGATGTTAAAACAAGTAATGTTATGCTTGATTCCCATTATAATGCTAAGCTAGGTGATTTCGGCATGGCGAGGTGGCTAGAACATGAACTTGAGTATGAGTTTAAGTACAATTCTAGCAATAAGAAAGCTTCAAGTAGAATTGATCATTTCAAATTAGGAGAAACTTCAAGAATCGGTGGAACAATTGGTTATCTTCCACCAGAAAGCTTACAAAAACTAAGCAATGGTACATCAAAATGTGATGTATTTAGCTTTGGTATTGTTGTGCTTGAAATTGTATCAGGAAGAAGAGCTATAGATTTAGCATATTCGGACGATAAAATCATTTTGCTTGATTGGATTAGAAGGCTTTGTGATGAAGGGAAGCTTATAGAAGCAGCTGATACAAGGTTTCAAAAAGATGGATCATATAATTTTTCTGAGATGAAGCATTTCATTCATATAGGTCTTCTTTGTACACTTCATGATCCAAATTTAAGGCCTAATATGAAATGGATTGTGGAAGCACTTTCTGATTTAAGTTTTAAACTTCCTTCACTTCCTTCATTTCTATCACATCCTCTTTATATCTCTTTGTCTTCACCAAGTGAAACTACTAGTCCTAGTAGTACTAGTGGCACGGTTACGGTCTCGGAAAATGTTAGCTTGATCACAAACTATAGTTCATCAAACTATGTTACAGCTGCAGGTGAAACAATTTATGTAACTGCTGAAAACAAAAATAGTGGAATCAATTCTTCTAATAAGCATCATCATCATCATCATCATCATAATCATAACAGGCAACGATTTCCGGTGGTTGAAACTCCGAGAGAAATCTCATACAAAGAGATTGTTTGTGCTACAAATAATTTCTCAGAGTTAAGAAGGGTAGCTGAACTTGACTTTGGAACTGCTTATCATGGAGTTCTTGATGACAATTGCCATGTTTTGGTGAAAAGGTTAGGAATGAAGACATGTCCTGCGTTGCGCGATAGATTCTCGAACGAACTCAGAAATCTTGGTAAGCTTCGGCATAGGAATTTGGTTCAACTTCGAGGATGGTGTACCGAACAAGGGGAGATGCTCGTGGTTTACGATTACTCTGCTAGTAGAATTCTCAGTCAACAGCTTCTTCAAATTCATAACAAAGGTATGAACGAAGTACTCGAATGGCATCATAGGTACAACATAGTGAAATCACTTGCTTCTGCTGTTCTTTATCTACATGAAGAATGGGATGAACAAGTGATTCACAAAAACATTACCTCATCAGCTGTTATTCTTGAACAAGATATGAATCCAAGACTTAGTAGTTTTGCTCTAGCTGAATTTTTGTCAAGGAATGAGCATGGCCATCATGTAGCCGACGATGCTAACAAATCAGTTCGAGGGATTTTCGGCTACATGTCACCGGAATATGTTGAGTCTGGCGAAGCAACTACAGAAGCTGATGTTTACAGTTTCGGCGTGGTGGTGCTTGAAGTTGTTAGTGGACAAATGGCAGTGGATTTTAGGTACCAAGAGGTTCTTCTGGTGAAAAAAGTTCATGAATTTGTGGTGAGAAAAAGACCATTGAAGGAATTAGCTGATATAAGACTTAATGGAGAGTATAATGAGAAAGAACTGATGAGATTGGTAAGATTAGGAATTGCATGCACTAGTGGTGATCCTAAATTGAGACCAAGTATGAGACAAATTGTGAGCATTCTTGATGGAAATGATAAATTACTCAACATGATAAAGAAGGAAAGTAGGGAAGAATGGAGAGAAAGAAATTCAAGTTCTTTGTCTATGATTAGGAGAATTCAAGCTTTAGGAATACAGTAA 2655 0.3605 MIHTHVQTSNYFLSQKTIITKNKTMQLHNLCIVLPQNSGELMKQQEPQKSFKQKSFKSSKKQKFKSKSSSSRACGGGQQVLDLLHDSLSKLCNSKWLVGAKRICKNGGVQKEKKENSTMFHDMDGVQFGVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKALLPSDGTLVAVKCCLSEKGKQFDKSFLAELSAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRKPGNLKGEQPLGWRQREKIVKGLSAALYYLHEQLETQIIHRDVKTSNVMLDSHYNAKLGDFGMARWLEHELEYEFKYNSSNKKASSRIDHFKLGETSRIGGTIGYLPPESLQKLSNGTSKCDVFSFGIVVLEIVSGRRAIDLAYSDDKIILLDWIRRLCDEGKLIEAADTRFQKDGSYNFSEMKHFIHIGLLCTLHDPNLRPNMKWIVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSPSSTSGTVTVSENVSLITNYSSSNYVTAAGETIYVTAENKNSGINSSNKHHHHHHHHNHNRQRFPVVETPREISYKEIVCATNNFSELRRVAELDFGTAYHGVLDDNCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLLQIHNKGMNEVLEWHHRYNIVKSLASAVLYLHEEWDEQVIHKNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVADDANKSVRGIFGYMSPEYVESGEATTEADVYSFGVVVLEVVSGQMAVDFRYQEVLLVKKVHEFVVRKRPLKELADIRLNGEYNEKELMRLVRLGIACTSGDPKLRPSMRQIVSILDGNDKLLNMIKKESREEWRERNSSSLSMIRRIQALGIQ* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2532 884 ProSiteProfiles Protein kinase domain profile. 152 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2532 884 SMART serkin_6 152 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2532 884 Gene3D Transferase(Phosphotransferase) domain 1 650 872 - -
Tpr6g2532 884 CDD STKc_IRAK 578 848 - -
Tpr6g2532 884 SUPERFAMILY Protein kinase-like (PK-like) 545 846 IPR011009 -
Tpr6g2532 884 Pfam Protein tyrosine and serine/threonine kinase 573 846 IPR001245 GO:0004672|GO:0006468
Tpr6g2532 884 Pfam Protein kinase domain 152 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2532 884 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 25 883 - -
Tpr6g2532 884 Gene3D Transferase(Phosphotransferase) domain 1 230 458 - -
Tpr6g2532 884 MobiDBLite consensus disorder prediction 49 71 - -
Tpr6g2532 884 Gene3D Phosphorylase Kinase; domain 1 525 643 - -
Tpr6g2532 884 ProSiteProfiles Protein kinase domain profile. 567 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2532 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Tpr6g2532 884 SUPERFAMILY Protein kinase-like (PK-like) 136 482 IPR011009 -
Tpr6g2532 884 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Tpr6g2532 884 PANTHER - 25 883 - -
Tpr6g2532 884 Gene3D Phosphorylase Kinase; domain 1 126 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2532 Tpr-Chr6 27629172 27632296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2532 552 874 Receptor kinase-like Gene Family AT3G59740 32.822 1.50e-46 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g2532 PK_Tyr_Ser-Thr 4.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2532 - - gmx:100796108 1233.39