Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2526 ATGTCCTTCAATAATCAATCAAAGTCCGATAAGAGCGACACCGCGTACCGACGAACCGGTCGATCAACCAGCTTCAATCAGCAGCGAGGTAACACCGGTGGTGGTACATACGTTAAGGCCGGCACCGGCGCCGCCGCGCCTTCACCCTCACTTAACTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCTACCCAGCTGAATTCAGCCGAGTCTAATTATGCTTCTGCAGTCCGAGCAACACCGAATGGTTCCCATTCCCATGTACAGCCGCAATTTCATGGAGGGTTTGATGCATCAGTTACAAATGCAACTGCCAAGACATCCGAATCATCAGCTGCACAGAGGATCACCAGAGCTGTTCCTAAAGCTCCTATTTCTCAACCTCCCCCCGTGAGTTCTGATTCAGCAGCACCTAAAACCCCTGCTAAGGGAGATGCATCCAAAGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCATTGTGAATGTGATGACGATTCCTGCTCGCACAAGCTCGGCTCCTCCTAATATAGATGAGCAAAATCGTGATCAGGCTCGTCATGATTCTCTAAGGCCTGTGCCTTCTGTTCCAACACCTACTGTTCCAAAGCAGCTGCCAGTGAAAAATGATACAGGTGTCGCCGACCAATCTAAGGTTGGAGAAACTCATATTGGTACAAGGGCAAAAAAGGATACCCAGGTGTCACCTTTACCCCCACCAAGCCTTATGCAGAATCATTCTGTTGTTCCTCTAACTGGAATGTCAATGCCATATCACCAGTCACAAGCACCCATGCACTTCGGTGCTGCTAATCCACAAATTCAATCTCATGGTATGTCAACAGCACCTCTTCAGATGCCTTTACCAATGCCTTTTCAAATTGGAAACGCTGCACAAGTGCAACAACAGGTATTTGTTTCAGGTCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAACATCAAGGCCAAAATATAGGTTACATTCCTCAAATTGGTCATCAATTTCCCCATCAGTTTGGCAACATGGGTATGGGCATTAACCCACAATTTTCCCCACAGCAAGGAGGAAAATTTGCTGGGCCTCGTAAAACTACCCCGGTGAAAATAACTCACCCTGATACCCACGAAGAGCTTAGACTTGATAAAAGGGCAGATGATGGTGGGTCATCAGGTTCTAGGTCTCATTCTAGCAAGCCTTCTCAATCTCCATCTGTCAAGCCATTTGCTGCTTCTCATGCTAACGCTCAGCCACCAAGAATTAATTATGCTGTGAGCCATGGTCCACAATTATCATCGCATAATACCCTGCCTGGCAATAAAATTGTCACTTCTATTCCTGGCAATGTTGAACAACGTAATCAAGAATTTTCCCATGATATGCCTAATGCAATTTCATCAACTCCTTTAGGAGTATCTTCTGTATCTATAAAGCCATGTGGTGGATCTGGATCTATGGACTCCTCATTTGCCAATTCCAGTAATTCTCAAAAGGGTGGATCTCCTATTTCCTCAGTAACATCTAGTGATGTTTACTCTTTGGTGCCTCCAAAAGGACCTGAAACTTGTTCTGAAATCTCTTCCCAACAATCTACTGCTGCATCTGTTTCTGCTGAGAAGCTTACATCAGCTTCCTTGTTGCCTTCTTCAACTGCTTTTAGTGAGAATTCTGTTTGTGCTCTTAATGAAGGCAGAAACAAGGAATCTCTTAGTAGATCAAATTCTTTGAAGGATAATCAGAAGAGACTGCAGAAGAAAGCCCAATTGCAACATCAGGTGGATGTACAATCTTCTGCTGTGGGTAATGAACCTTCCCTAGCTGATGATGGTGGTATCTCTGATTGTGTAGTTTCTGAAACTGTAGGAACTAAAACACCCTATTCTGCAGCAACTGCCAATGAAGATCTATTAGCAATAGCTTCTGGCACAGTTTCAGCTACCAGTGAGAGCATACCTTCTTCTGTTGAAGAGAAGACCACTGGTTCTACAAAGGTGTCTGCTAGTGCTTCAGCGGAAGGACCTGTTACTCAAGCTGTGGATAGTTTGAACAATCATAAGAGTGATGAGCTAGATGTATTCTCCCGAGAGGATAAACAGCTGAGGCAGAACGAATTAGTCGGTGATAAAATTAAAATTTCAACTCCGCAGATAAGTAAAAATGTCAATGGTGACGGCGGAGAATTTAGCCACCTCAAAAAAGGTGCTTCAGAGATAAACACTGGGGTTGTAACTTTGCAGACTGGGCTGCAAGTACAGGATGAAATTGAATCTGCAAGTTGCAGCATAGACCGTGATAGGATGGCTGATAATTTAGGCATGTCTACTTCTGCACTGAATTCTAAAGACGCGTCTTTAAGCAGCAACGACGGTGTAGTGGGTAATGAAGTCACTTCTACAAATTCTGGCACATCAGATCATCAATCTTCTGGCCATCTCGAAACAAATTTAAAACATTGCAAAGATAGTTCGGAGGAATCTGGCACTGGCGCAGTGTCTCTTCCAGCAGCATCTGTTACTATGGACAGGCCAATTTTAGAGGCAAGTAAGGTGAAAGGTACATCAAAGGGGAAGAAGAAACTAAAGGAATTTCTTCAGAAAGCAGATGCTTCTGGGTCTACTGCTGATCTGTATAACGCGTATAAGGGACCTGAGGAAAAGAAAGAAGTTGTTGCAAGTTCAGAGACTTCTGGAAATTTGAAGCAGCTGCCTATGGATGCTGCTCAGCCAGCTGCAGTTGCAAATGAACAATGTGGGCAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGCCGCCGATATGTCCACACCTAAGCTAGAAGTATCAGATAAAACTCAACAGGACAGCAACGGAAGTGAAGTTACTGGCAAAAAGTACTCTCGAGATTTCCTTTTAAAATTTGCAGAGCAGTGCTCTGAGCTTCCCGAAGGGTTTGAAATCACGGCAGACATAGCTGAAGCTTTGATGGGTTCGAATATTGGTTCTCATGTTATGGTACGCGACACACATCCTTCTCCTGGAAGAAATACAGATAGGTCAGGTGGGATGTCTCGGATAGATCGTCGTGGGAGTGGTGTTATCGAGGATGATAAATGGAGTAAAGTTCCTGGTGCTTTTCATTATGATAATGGTAATGTAGGTAATACAGGATTCCGACCTGCACATGGTGGCAATGCTGGTGTTTTAAGGAATCCACGCCCACAAGGAACTGTGCAGTATGGTGGAGGGATTCTTTCTGGGCCAATGCAATCAATGGTACATCAAGGAGGAATGCAAAGAAATAGCCCTGATGGCGAAAGGTGGCAGCGTGCTACTAGCTTCCAGCAGCAGAGGGGTTTAATGCCATCTCCTTCTTCTCAATCTCCTTTGCAGACTATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGGCAGTTGAAAGGTATATTGAACAAGTTAACACCCCAGAATTTTGAGAAGCTATTTGAGCAGGTTAAAGCAGTTAATATTGATAATGTAGTCACTCTCACTGGTGTCATCTCCCAAATCTTTGAGAAGGCCTTGATGGAACCCACTTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCGTTGCCTGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAATAAGTGCCAGGAAGAATTTGAGAGGGGTGAGAGAGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCCGGTTAATTGGAGAACTATATAAGAAGAAAATGCTGACAGAGAGAATAATGCACGAGTGCATAAAAAAGTTACTTGGTCAGTGTCAGAATCCGGATGAAGAAGACATCGAAGCTTTGTGCAAACTGATGAGTACTATTGGGGAGATGATTGACCACCCCAAAGCCAAGGAACATATAGATGTATATTTTGAAAGAATTAAATTATTATCAAACAACATGAATTTGTCTTCTAGAGTGAGGTTCATGTTAAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAGGGGCCAAAAAAGATTGAAGAGGTGCACCGGGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCTGGGTCGTGGTATGGGTATTAGTACACCAAGAAGGACCACCCCTACGGATTTTGGTTCAAGAGGTTCATCTATGTTATCCCCTTCTAATGCTCAGATGGGTGGATTGCCTAATCAAATGCGTGGGTATGGTTCTCAGGATGTTCGTGGGTATGAAAGGCAATCTTATGAGGCTAGGCCGCTATCTATTCCCTTGCTTCAAAGATCTTCAGGTGATGAGTCAATAACCTTGGGACCCCAAGGTGGTCTTGCTAGAGGAATGTCTAGCAGAGGTCCAGCTGCCGTTTCCAGTTTCGGTGGTCCTAATGGTTACAGTAATTTATCAGAGCGCGCTTCATACAGCCCTAGGGAGGACCTCACACCAAGATATGTTCCGAATAGATTTGCTGGTCCAACTGCTTATGATCAATCAAGTGCTCCAGAGCATAGTGTGAATTACAGTAATAGGGATTTGGGAAGTGCAGATAGGTTTCTTGATAGACCTGTTGTAAATCCACCTCCTGCCCGAGCACAAGAGACTGCACTCTCCCAGAATACCTCTTTTGAAAAGGGTTTGTCAGAAGAGAAACTACAGAAGATGTCCATGGCAGCAATTAAAGAATACTATAGTGCTAGAGATGTAAACGAAGTTGTTTTGTGCGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTATCATTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAGAGAGATCTTTTGGCCAAACTGCTGATCGACCTTGTGAAATCTCATGACGGTACCTTAAGTCAACCCCAGCTCATTAAAGGGTTGGAATCTGTTCTAAGTACTTTGGAAGATTTTGTTACGGATGCCCCAAGAGCACCGGAGTATCTTGGTCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGCCTCTTTGAAAGAGATTGGGCTGTTAATACGTGATGGCGGAGAGGAATCAAGTAGCCGCTTACAATTTGGACTTGCAGCTGACATTCTCGGAAGTACCTTGGAAGTGATACAAACAGAGAAGGGTGATGCTTTCTTGAATGAGATCCAGACAAGCTCCAACTTGCAATTGAAGACCTTCCGTCCGCCAGAACCTATTAAATCCCGGAAGCTAGAAAAATTCTTTCCTTTGTGGGAGTAG 5379 0.4399 MSFNNQSKSDKSDTAYRRTGRSTSFNQQRGNTGGGTYVKAGTGAAAPSPSLNSSRSFNKKSNNHAQGGPSRVNPTQLNSAESNYASAVRATPNGSHSHVQPQFHGGFDASVTNATAKTSESSAAQRITRAVPKAPISQPPPVSSDSAAPKTPAKGDASKAFPFQFGSISPGIVNVMTIPARTSSAPPNIDEQNRDQARHDSLRPVPSVPTPTVPKQLPVKNDTGVADQSKVGETHIGTRAKKDTQVSPLPPPSLMQNHSVVPLTGMSMPYHQSQAPMHFGAANPQIQSHGMSTAPLQMPLPMPFQIGNAAQVQQQVFVSGLQPHPIHPQGIMHQHQGQNIGYIPQIGHQFPHQFGNMGMGINPQFSPQQGGKFAGPRKTTPVKITHPDTHEELRLDKRADDGGSSGSRSHSSKPSQSPSVKPFAASHANAQPPRINYAVSHGPQLSSHNTLPGNKIVTSIPGNVEQRNQEFSHDMPNAISSTPLGVSSVSIKPCGGSGSMDSSFANSSNSQKGGSPISSVTSSDVYSLVPPKGPETCSEISSQQSTAASVSAEKLTSASLLPSSTAFSENSVCALNEGRNKESLSRSNSLKDNQKRLQKKAQLQHQVDVQSSAVGNEPSLADDGGISDCVVSETVGTKTPYSAATANEDLLAIASGTVSATSESIPSSVEEKTTGSTKVSASASAEGPVTQAVDSLNNHKSDELDVFSREDKQLRQNELVGDKIKISTPQISKNVNGDGGEFSHLKKGASEINTGVVTLQTGLQVQDEIESASCSIDRDRMADNLGMSTSALNSKDASLSSNDGVVGNEVTSTNSGTSDHQSSGHLETNLKHCKDSSEESGTGAVSLPAASVTMDRPILEASKVKGTSKGKKKLKEFLQKADASGSTADLYNAYKGPEEKKEVVASSETSGNLKQLPMDAAQPAAVANEQCGQSKAELEDWEDAADMSTPKLEVSDKTQQDSNGSEVTGKKYSRDFLLKFAEQCSELPEGFEITADIAEALMGSNIGSHVMVRDTHPSPGRNTDRSGGMSRIDRRGSGVIEDDKWSKVPGAFHYDNGNVGNTGFRPAHGGNAGVLRNPRPQGTVQYGGGILSGPMQSMVHQGGMQRNSPDGERWQRATSFQQQRGLMPSPSSQSPLQTMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNVVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHIDVYFERIKLLSNNMNLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRLGRGMGISTPRRTTPTDFGSRGSSMLSPSNAQMGGLPNQMRGYGSQDVRGYERQSYEARPLSIPLLQRSSGDESITLGPQGGLARGMSSRGPAAVSSFGGPNGYSNLSERASYSPREDLTPRYVPNRFAGPTAYDQSSAPEHSVNYSNRDLGSADRFLDRPVVNPPPARAQETALSQNTSFEKGLSEEKLQKMSMAAIKEYYSARDVNEVVLCVKDLNSPSFHPSMVYHWVTDSFERKDTERDLLAKLLIDLVKSHDGTLSQPQLIKGLESVLSTLEDFVTDAPRAPEYLGRIFAKAITEHVASLKEIGLLIRDGGEESSSRLQFGLAADILGSTLEVIQTEKGDAFLNEIQTSSNLQLKTFRPPEPIKSRKLEKFFPLWE* 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 46 83 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 183 252 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1251 1280 - -
Tpr6g2526 1792 SMART if4_15 1159 1381 IPR003890 GO:0003723|GO:0005515
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 500 535 - -
Tpr6g2526 1792 Gene3D - 1159 1394 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 500 526 - -
Tpr6g2526 1792 Pfam MIF4G domain 1159 1380 IPR003890 GO:0003723|GO:0005515
Tpr6g2526 1792 SUPERFAMILY ARM repeat 1153 1383 IPR016024 -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 405 424 - -
Tpr6g2526 1792 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 136 1778 IPR045208 GO:0003743
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 578 609 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 383 404 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 661 686 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 952 968 - -
Tpr6g2526 1792 Pfam MA3 domain 1603 1711 IPR003891 -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1016 1037 - -
Tpr6g2526 1792 ProSiteProfiles MI domain profile. 1600 1724 IPR003891 -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 18 35 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1384 1405 - -
Tpr6g2526 1792 Coils Coil 1241 1261 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 584 602 - -
Tpr6g2526 1792 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 136 1778 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1 83 - -
Tpr6g2526 1792 SUPERFAMILY ARM repeat 1594 1778 IPR016024 -
Tpr6g2526 1792 SMART ma3_7 1601 1715 IPR003891 -
Tpr6g2526 1792 Gene3D - 1592 1788 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 811 847 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1420 1438 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 1384 1438 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 368 429 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 114 155 - -
Tpr6g2526 1792 MobiDBLite consensus disorder prediction 943 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2526 Tpr-Chr6 27587467 27596573 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2526 1 1787 Eukaryotic Initiation Factors Gene Family AT3G60240 43.453 0.0 1200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2526 K03260 - gmx:100796636 2313.49