Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2519 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCACCTGATAAACCTCCATCTAGACCTGTTCCATATGAGATTGATACATCGGATCATTTTTACACTGAAATGGCAACCTCTGACCGAGATGAGTTGATTAGATGGGCTCGGGACATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAACGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATCTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGAATGGGTATTTTTTCAAACATAGAACGGTTGTTGCAGACGGATCCGAACATGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTTAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTGTCAGTCTCTTAAGGAATGAGGATTTTTCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTTCATGTAA 993 0.422 MAGKRELVLGICAPGIVEVPPDKPPSRPVPYEIDTSDHFYTEMATSDRDELIRWARDIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVENGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWALEQCVSLLRNEDFSRYFQHRLQWFVVFM* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2519 330 Pfam MULE transposase domain 255 312 IPR018289 -
Tpr6g2519 330 Pfam Transcription factor AFT 88 138 IPR014842 GO:0000981|GO:0036086
Tpr6g2519 330 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 307 - -
Tpr6g2519 330 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 307 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2519 Tpr-Chr6 27535564 27536608 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g2519 MULE 8.6e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2519 - - cit:107176176 248.054