Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2503 ATGAAGAAATCACCCATGCTATTCTTATTTTCAACCTTTCAGTTCATAAAGCTTCTTACAATATGTTTTGGTGCATTCATAATAGCCTCTTCTACTCATGTTGTTGATTCTTCAATGACTATTTCATCTTCTTCAACCATGAGTATAAGAATTAGAGAAGCAAGTTCATTGTTGAAGTGGAAAAGCAACCTTGAAATTGAAAGCCAAACTTTGTTATCTTCATGGACAGGCAACAATTCATGCAACTGGCTAGGAATTACATGTGATGAAGATTACAAATTTGTGTCCAATATAAATCTCACAAATATGAGATTAAGAGGTACACTTGAAACTCTTAACTTCTCATCACTTTCAAATATCATCACTCTTAATCTTAGTAACAACTTCTTGAATGGAAGTATTCCTCCCGATGTCGGGGCGTTGTACAAACTATACCATCTTGATCTCAGTAACAATGATCTCACAGGAACAATCCCATATGAAATAACAAAGTTGACCAATCTTCATGTTTTATATTTAGATAACAATGTTTTCAATGGTTTCATTCCTAATGAAATAGGTGCATTAAGAAATCTAAGAGAACTTAGTATTTCGTATGCGAATTTCACAGGGACTATTCCAATTTCGATCGGGAACTTAGCCTTCTTGTCACACTTGAATCTAGGAGGTAACAACCTTATAGGAAACATACCAAAAGAAATTTGGAATTTGAGCAAGTTAAAGTACTTAGCAGCTGAAAAAAACAAATTCAATGGTTCTATAATTGCTAAAGATATTGTGAATTTGCATAAGCTAGAAACTCTAGATCTCAGCAATAGCGATCTTTCCATTAATGGTCCTATCCTAGAAGACTTGTGGAAGTTGGAAAATTTGACATACCTTTCTCTTTCACTTTGCAAAGTCATAGGACATATCCCATTTTCTATAGGAAAGTTGGATAACTTATTGTATCTAAATTTAGCAAATAACCGAATTTATGGCCACATTCCTAAGGAAATTGGGAAATTGATCAACATGAAACATTTAAGGCTTAATGATAATAGTCTTTCTGGTTTCATACCTCATGAAATTGGAATGATGAGAAACTTGGTTGAAATCAATTTGTCTAATAACTCTTTATCAGGTAAAATCCCACATACAATTGGAAACTTAAGCAAGTTACAAAATCTTACCATATTTACAAACCATCTCAGTGGGCCACTTCCTACAGAAATCAACATGCTTTTCAATTTGGCATATTTCTTTATATTTGATAACGATTTCATTGGTCAACTCCCACATAATATTTGCATTGGTGGAAAGTTGAAATACTTTGCTGTTTTGAAAAACAACTTCACTGGTCCTGTTCCGATGAGTTTGAAGAATTGCTCTAGCATTGTAAGAATTAGGCTTGAACAAAACCAACTTTCTGGAAATATTACAAATTACTTTGGTGTGTATCCAAATTTGTACTATATGCAATTAAGTGGAAATAAGTTTTATGGCCACATTTCACCCGACTGGGGAAAATGTCGAAGCTTGGCGATCCTTAATATCTCTGATAATAACATATCAGGTGGTATACCTCCAGAACTAGGCGAGGCAACCAACTTATATTCACTTGACCTATCTTCGAACTACCTCACCGGAAAAATTCCGAAGGAGTTAGGCAACTTGAGTTCATTGTCCAAACTCTTGATAAGTAACAACCGTCTTTCAGGAAACGTTCCTTTAGAAATAACATCACTAAAGGAACTTGAGACGTTAAATCTTGCGGGAAATGATCTAAGTGGCTATGTCACAAAACAACTTGGATATTTTCCTAGACTATTGAACATGAATTTGAGCCATAACAAATTTATAGGAAATATTCCTGTTGAGTTTGGCCAATTTAAAGTCATTCAAAGTCTTGATCTCAGTGGGAATTTTTTCGATGGGACAATACCGTTAACACTTGCACAACTGATATACTTAGAGTCATTGAATATATCACATAACAACCTTTTTGGATTTATTCCCTCAAACTTTGATCAGATGCTCAGCTTGTTATCTGTTGACATATCATTTAATCAATTCGAGGGTCCGATTCCAAACATTCCGGCTTTCCAAAAAGCCACCATTGAAGTTTTCATAAATAACAAAAGATTGTGTGGTAATGTCTCTGGCTTAGAGCCTTGCGCAACATCAAGCGGTACTCGATCTCATAATCGTAAGATCAATAAAGTCTTATTGATAATTTTACCCCTTGCAATTGGAACTCTAATACTAGCATTAGTTTGTTTCAAATTCTCGAATCATCTCTGCAAAACTTCAACCACAAGAGAATATTTAGCTCGAGGGAACGTTATTGATACTCAAAACCTATTTACCATATGGAGTTTTGATGGAAAAATGGTGTATGAGAATATTATTGAAGCCACAGAAGATTTCGATGATAAACATCTCATCGGAGTTGGAGGTCATGGAAGTGTTTACAAAGCGGAATTAGACACAGGTCAAGTAGTTGCTGTGAAAAAACTCCATTCAGTAGTAGATGAAGAAAATTCCAACCTAAAATCTTTCACAAGTGAGATCCAAGCTCTGACAGAGATTAGACACCGTAACATTGTAAAGCTACATGGATTTTGTTTGCATTCTCGAGCCTCGTTTTTGGTCTACGAATTCATGGAAAAAGGAAGTCTAGATAACATTTTAAAAGATGATGATCAAGCAATAGCATTTGATTGGAATAAAAGAGTGAATATCATTAAAGATATAGCTAATGCCTTATGTTATATGCATCATCATTGCTCGCCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATACTTCTAAATTTAGAATATGTGGCTCATGTCTCTGACTTCGGAATTGCTAAGCTTCTTAATCCTAACTCAACCAACTGGTCCTCATATGCAGGAACCTTTGGATATGCTGCTCCAGAATATGCATACACAATGAAAGTGAATGAGAAATGTGACGTGTATAGTTTCGGAGTGTTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGGATTTATATATCATTCCTTACTATCACCTTTGTGGAAAATTATGAGCAACATACTTGATGATATGTCGCTGGCGGATAAGTTGGATAAACGTCTCCCTCAGCCTTCGAATCCTTTTGTTAACGAGTTAGTATCGATTGCAAGGATAGCTATTGTCTGCTTAACTGAAAGGTCACAATCTCGCCCTAGTATGGAGCAGGTCACCAAAGAACTTGGAAATGTCATATTTGTCTTCAATGGTTTAGGTTCATATTATCAAACAGAAACACACAAATAG 3294 0.3519 MKKSPMLFLFSTFQFIKLLTICFGAFIIASSTHVVDSSMTISSSSTMSIRIREASSLLKWKSNLEIESQTLLSSWTGNNSCNWLGITCDEDYKFVSNINLTNMRLRGTLETLNFSSLSNIITLNLSNNFLNGSIPPDVGALYKLYHLDLSNNDLTGTIPYEITKLTNLHVLYLDNNVFNGFIPNEIGALRNLRELSISYANFTGTIPISIGNLAFLSHLNLGGNNLIGNIPKEIWNLSKLKYLAAEKNKFNGSIIAKDIVNLHKLETLDLSNSDLSINGPILEDLWKLENLTYLSLSLCKVIGHIPFSIGKLDNLLYLNLANNRIYGHIPKEIGKLINMKHLRLNDNSLSGFIPHEIGMMRNLVEINLSNNSLSGKIPHTIGNLSKLQNLTIFTNHLSGPLPTEINMLFNLAYFFIFDNDFIGQLPHNICIGGKLKYFAVLKNNFTGPVPMSLKNCSSIVRIRLEQNQLSGNITNYFGVYPNLYYMQLSGNKFYGHISPDWGKCRSLAILNISDNNISGGIPPELGEATNLYSLDLSSNYLTGKIPKELGNLSSLSKLLISNNRLSGNVPLEITSLKELETLNLAGNDLSGYVTKQLGYFPRLLNMNLSHNKFIGNIPVEFGQFKVIQSLDLSGNFFDGTIPLTLAQLIYLESLNISHNNLFGFIPSNFDQMLSLLSVDISFNQFEGPIPNIPAFQKATIEVFINNKRLCGNVSGLEPCATSSGTRSHNRKINKVLLIILPLAIGTLILALVCFKFSNHLCKTSTTREYLARGNVIDTQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGHGSVYKAELDTGQVVAVKKLHSVVDEENSNLKSFTSEIQALTEIRHRNIVKLHGFCLHSRASFLVYEFMEKGSLDNILKDDDQAIAFDWNKRVNIIKDIANALCYMHHHCSPPIVHRDISSKNILLNLEYVAHVSDFGIAKLLNPNSTNWSSYAGTFGYAAPEYAYTMKVNEKCDVYSFGVLALEILFGKHPGGFIYHSLLSPLWKIMSNILDDMSLADKLDKRLPQPSNPFVNELVSIARIAIVCLTERSQSRPSMEQVTKELGNVIFVFNGLGSYYQTETHK* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2503 1097 Pfam Leucine rich repeat 143 199 IPR001611 GO:0005515
Tpr6g2503 1097 ProSitePatterns Tyrosine protein kinases specific active-site signature. 927 939 IPR008266 GO:0004672|GO:0006468
Tpr6g2503 1097 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 193 278 - -
Tpr6g2503 1097 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 276 1078 - -
Tpr6g2503 1097 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 44 193 - -
Tpr6g2503 1097 Gene3D Ribonuclease Inhibitor 407 722 IPR032675 -
Tpr6g2503 1097 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 276 1078 - -
Tpr6g2503 1097 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 193 - -
Tpr6g2503 1097 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 193 278 - -
Tpr6g2503 1097 Gene3D Transferase(Phosphotransferase) domain 1 882 1083 - -
Tpr6g2503 1097 Pfam Protein kinase domain 804 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2503 1097 Gene3D Ribonuclease Inhibitor 205 301 IPR032675 -
Tpr6g2503 1097 SUPERFAMILY L domain-like 79 423 - -
Tpr6g2503 1097 Gene3D Ribonuclease Inhibitor 51 204 IPR032675 -
Tpr6g2503 1097 Gene3D Ribonuclease Inhibitor 302 406 IPR032675 -
Tpr6g2503 1097 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Tpr6g2503 1097 SUPERFAMILY Protein kinase-like (PK-like) 777 1077 IPR011009 -
Tpr6g2503 1097 ProSiteProfiles Protein kinase domain profile. 803 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2503 1097 Pfam Leucine rich repeat N-terminal domain 53 89 IPR013210 -
Tpr6g2503 1097 Pfam Leucine Rich Repeat 530 552 IPR001611 GO:0005515
Tpr6g2503 1097 Pfam Leucine Rich Repeat 651 670 IPR001611 GO:0005515
Tpr6g2503 1097 Pfam Leucine Rich Repeat 362 384 IPR001611 GO:0005515
Tpr6g2503 1097 Gene3D Phosphorylase Kinase; domain 1 767 881 - -
Tpr6g2503 1097 Coils Coil 837 857 - -
Tpr6g2503 1097 SUPERFAMILY L domain-like 436 711 - -
Tpr6g2503 1097 SMART LRR_typ_2 213 237 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 165 189 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 576 599 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 312 336 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 648 671 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 117 141 IPR003591 -
Tpr6g2503 1097 SMART LRR_typ_2 360 384 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2503 Tpr-Chr6 27426106 27430020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2503 38 975 Receptor kinase-like Gene Family AT4G08850 42.360 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g2503 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2503 - - mtr:MTR_7g045710 1287.71