Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2501 ATGGATTTTGTAGAAGTGGACCCGGACAAGGGAAATGAGCCTGACCATAGTTGTCTAGAAGAGAGTACAAATATATTTGATGGAGTTGAAGTTCAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGAAGCTGCCAGGACATTTTATGTTGGATATGCTAGACGGGTAGGATTTGCTGTCCGTGTTATGCAACGTCGACGTTCTGGAATTGATGGCAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGATTCTCGCCCAATAACAAGGGAACATTGGGGAAAGATAAAAGACCAAGGCCTAGTGCCCGAGAAGGTTGCAATGCAACAATTTTAGTTAAGATGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCTCTAATTTCTACAGCTAATGGTTTCAGCACAGAGGACGATAAAGATAAGAAAATTGCAGAACTTACTATGGAGTTGGAGCACCAAGATGAACTATGTGCTGCATATAGAGGAAAATTACTCAACTTCATAAACAATGTTGAGGAACAAACAGAAGAAATGTCCACAAGAATTCAACTCATTATCACAAATATAAAGAGAGCTGAATCTGAAATGCAAATATGTTCACAGAACAGATTGCCTTAG 648 0.3966 MDFVEVDPDKGNEPDHSCLEESTNIFDGVEVQEPYVGMEFDSEEAARTFYVGYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTLGKDKRPRPSAREGCNATILVKMEKSGKWVVTRFIKDHNHPLISTANGFSTEDDKDKKIAELTMELEHQDELCAAYRGKLLNFINNVEEQTEEMSTRIQLIITNIKRAESEMQICSQNRLP* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2501 215 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 17 210 - -
Tpr6g2501 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 210 - -
Tpr6g2501 215 MobiDBLite consensus disorder prediction 87 106 - -
Tpr6g2501 215 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2501 Tpr-Chr6 27400613 27406467 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g2501 FAR1 5.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2501 - - vun:114183030 351.673