Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2495 ATGGCAAACTTCTACTTCGTTTTGCTTCACATTTCTCTAACCTTTGTGTTGACACAATCAGCACCAAGAAAGTCTCTAATAACCAAACTTCCAGGCTTCAATGGCTCTCTACCTTCCAAGCACTATGCAGGGTATGTGACAGTGGATGAACATCATGGTAAAAACTTGTATTACTATTTTGTTGAATCAGAAGGTAATTCATCAAAGGACCCTGTGGTTCTATGGCTTAACGGTGGACCAGGATGTTCTAGTTTTGATGGCTTTGTATATGAGCATGGTCCTTTTAATTTTGAAAAACCTGTCACCAAGGAAGCTCTACCTAAGTTGCATGTCAATCCATATAGCTGGTCAAAGGTTTCCAATGTTATATATTTGGACTCTCCTGTTGGAGTAGGATTTTCATACTCAAAAAATGTATCTGATTACAACACTGGAGATGCTAAAACTGCCTCTGATACACATACTTTTCTCCTTAGATGGTTTGAATTATACCCTGAGTTCCTTGCCAATCCATTATTCATTGCTGGAGAGTCTTATGCTGGAGTTTATGTGCCTACTCTTGCTGATAAAATAGTGCAAGGAATTGAAGCTGAAACCAAACCCAAGTTGAATTTCAAGGGATATTTGGTTGGAAATCCAGTTGCTGATGAAATATTTGATGGCAATGCTCTTGTTCCTTTTGCACACGGGATGGGTCTTATCTCCGATGAAACATTTGAGGTAAAATTAAGATATTTAACGGACACAACAAAAGAATGCAACGGAACTTTTTATGAAACATCCAGCGTTAAATGCGAGAATTTGTTGAATAAAATTGAACAGGTAATACAAAATATAGACATATATAACATTTTGGAACCATGTTATCACAATGGAGGGGAAGAGGAAAACAAAAAATCAGATTCTAAGTTGCCATTAAGCTTTAGGCAATTGGGTAAGACTGAAAAATCTTTGCCTGTGAGGAAAAGAATGTTTGGTCGTGCTTGGCCCTATAAAGCTATTGTGAGAGATGGTTATGTACCAAGTTGGCCACAGCTTACAAGCAATAGTAATAGTGGTCCTCCTTGTGTTGACGATGAGGTTGCTAATGTATGGCTGAACAATCATAAGGTCAGGAAAGCTATTCACACTGTGAAGAAAAATGTGATCCCCAGGTGGAACTTATGTACTGGTCAACTTAAATACATTCATGATCTTGGGAGTATGATTCCATACCACAAGAAACTTACTTCCAAAGGATATAGAGCATTAATATACAGTGGTGATCATGACATGTGTGTCCCATTTACTGGAACCGAAGCATGGACAAGATCAATTGGATATAAAATTGTTGATGAATGGAGGTCTTGGTCAGTCAATGATCAAGTTGCTGGGTTTATACAAGGCTATGCCAACAATTTCACATTTCTGACCGTAAAGGGGTCTGGGCATACTGTTCCAGAATATAAACCACAGGAATCATTGTATTTTTACCAACATTTTATAAATGGGCTGCCTATATAA 1503 0.3792 MANFYFVLLHISLTFVLTQSAPRKSLITKLPGFNGSLPSKHYAGYVTVDEHHGKNLYYYFVESEGNSSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKPVTKEALPKLHVNPYSWSKVSNVIYLDSPVGVGFSYSKNVSDYNTGDAKTASDTHTFLLRWFELYPEFLANPLFIAGESYAGVYVPTLADKIVQGIEAETKPKLNFKGYLVGNPVADEIFDGNALVPFAHGMGLISDETFEVKLRYLTDTTKECNGTFYETSSVKCENLLNKIEQVIQNIDIYNILEPCYHNGGEEENKKSDSKLPLSFRQLGKTEKSLPVRKRMFGRAWPYKAIVRDGYVPSWPQLTSNSNSGPPCVDDEVANVWLNNHKVRKAIHTVKKNVIPRWNLCTGQLKYIHDLGSMIPYHKKLTSKGYRALIYSGDHDMCVPFTGTEAWTRSIGYKIVDEWRSWSVNDQVAGFIQGYANNFTFLTVKGSGHTVPEYKPQESLYFYQHFINGLPI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2495 500 Gene3D alpha/beta hydrolase 19 331 IPR029058 -
Tpr6g2495 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 467 480 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 Pfam Serine carboxypeptidase 31 497 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 ProSitePatterns Serine carboxypeptidases, histidine active site. 467 484 IPR033124 GO:0004185
Tpr6g2495 500 Gene3D - 353 499 - -
Tpr6g2495 500 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 497 - -
Tpr6g2495 500 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Tpr6g2495 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 497 IPR001563 GO:0004185|GO:0006508
Tpr6g2495 500 SUPERFAMILY alpha/beta-Hydrolases 27 499 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2495 Tpr-Chr6 27355527 27363053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2495 361 500 Calmodulin-binding Proteins AT2G22960 48.571 3.68e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2495 K16296 - gmx:100792057 733.021