Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2467 ATGAATTACGGCGGCGAAACGTTGGACTTCCGAAACCTTAAGGTAATATCCGCCGTTGGACGCGGTGCAAAGGGTGTCGTGTTCCTTGCAAGAACCTATGGATCATCGAAAGATGAATGGTGGGCTTTGAAACTTATGTCAAAAGAACTTCTTCAGAAGAAAAACAATAACAAAACCGGTGAATGCAGAAGGGTTAGATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTTTTGCCACGGTTAAAAGCTGTTGTTGAAACGGAGAACCTTGTTGGATTCGCTATTGATTATTGTCATGGTGGGAATTTGCATTCTCTTATGAAGAAACAACCGGAGAAAAAATTCTCTGAAGAAGCCATTAGGTTCTATGCTGTGGAATTGGTGTTAGCATTGGAGTATTTACACAAATTAGGAGTAGTTTATAGAGATTTGAAGCCCGAGAACATTATGATTCAACAAACGGGTCACATAATGCTCGTAGATTTCGACTTATCAAAGAAATTGAATCCAAAATCACCAAACTCACTGAGTTGCAACTCGTCACCAGGTTCCAAATCGCCAGAAATAAACACAAGAAAAATGAGATGGTTATCGAAGCTCTATTGTCATTGTCATTCTGGGATACCAGAATATGACATAGTGAATCAACTCGATTTTAACACGCCTTTTAAAAGGAGTGAGTCAGACTCAGTTGAAAAGTCAAACTCGTTCGTGGGAACCGAGGATTACGTGGCACCTGAAGTTATTTCAGGTCATGGACATAACTTAAGTGTTGATTGGTGGTCATACGGCATCGTTTTGTATGAGTTGTTTTATGGAACGACGCCGTTTAGTAGTCCTAATAGAAAGGAAACGTTTCACAAGATTTTAAATGTGGAGGTTGAACAAAAAGGTGAAACGACGCCGTTGAAGGATTTGATTGCTAAATTGCTTGAGAAAGATCCTGACCGTAGGATTCAAGTTGATGAAATAAAGGGTCATGATTTCTTTAAAGGTGTCAAGTGGGATACAGTGTTGGAAATTGCACGTCCACCGCATATTCCTCAAAATGAAGTTGTGGACAGAGCAGGGTTTTCTAAAAAAGATGTTGAGTCTTTTGTCCATGGAATATTTTTTCCAAAAAATAAAAATGATAATGGCGAAAAAGAGAAAAATAAGGAGGAGGTAAAAAAAGAAGATGGAAAGGAGAAGGAGAAGGAAAATGATGATAGTAATAATAATAATAATAATAAGAATGTGTGGGTTGAGAAGTTGGGGCAGAGTCAGACTAAAGATGAGAATTTTTTGATTTTTTGA 1302 0.381 MNYGGETLDFRNLKVISAVGRGAKGVVFLARTYGSSKDEWWALKLMSKELLQKKNNNKTGECRRVRFEQQILRRFDHPLLPRLKAVVETENLVGFAIDYCHGGNLHSLMKKQPEKKFSEEAIRFYAVELVLALEYLHKLGVVYRDLKPENIMIQQTGHIMLVDFDLSKKLNPKSPNSLSCNSSPGSKSPEINTRKMRWLSKLYCHCHSGIPEYDIVNQLDFNTPFKRSESDSVEKSNSFVGTEDYVAPEVISGHGHNLSVDWWSYGIVLYELFYGTTPFSSPNRKETFHKILNVEVEQKGETTPLKDLIAKLLEKDPDRRIQVDEIKGHDFFKGVKWDTVLEIARPPHIPQNEVVDRAGFSKKDVESFVHGIFFPKNKNDNGEKEKNKEEVKKEDGKEKEKENDDSNNNNNNKNVWVEKLGQSQTKDENFLIF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2467 433 MobiDBLite consensus disorder prediction 377 407 - -
Tpr6g2467 433 PANTHER FLIPPASE KINASE 1-RELATED 6 398 - -
Tpr6g2467 433 SUPERFAMILY Protein kinase-like (PK-like) 12 357 IPR011009 -
Tpr6g2467 433 Pfam Protein kinase domain 15 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2467 433 Pfam Protein kinase domain 234 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2467 433 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 398 - -
Tpr6g2467 433 Gene3D Transferase(Phosphotransferase) domain 1 231 351 - -
Tpr6g2467 433 Gene3D Transferase(Phosphotransferase) domain 1 104 194 - -
Tpr6g2467 433 SMART serkin_6 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2467 433 ProSiteProfiles Protein kinase domain profile. 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2467 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Tpr6g2467 433 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Tpr6g2467 433 MobiDBLite consensus disorder prediction 376 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2467 Tpr-Chr6 27095429 27097837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2467 7 381 AGC Kinase Gene Family AT4G13000 53.989 1.34e-131 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr6g2467 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2467 K20714 - gmx:100813693 544.658