Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2455 ATGAGCATAGTTGTTGAAGTTGTGGTGGCTCTAGGAGCAGTTTTGTTTGGATTGATCCATTTTTTGCATGTTTTGGTTTTGAAACCAAGATCACTAAGATCAAAACTTCATAAGCAGGGTATTCACGGTCCTTCTCCTCACTTCTACTTTGGTAATATCCAAGAAATCAAGACCCTTTTACTCCAACAACAAGAATCACAAGCCAAGCAAAAAGATGTCTGTGTTTCTATATCTCATAACTGGACTTCAACTTTGTTCCCTCATATTCATAAGTGGACAAATCAATATGGTCCAATATACTTATTTTCTTCTGGGAGTATACAATGGTTAATGGTGGCAGATATGGAGATGGTGAAGGAAATCCTCCTAAACACCTCATTGGATCTAGGAAAGCCTTCTTATCTTTCCAAAGATATGGGACCACTCCTAGGCCAAGGTATATTATCCTCAAGTGGACCTATTTGGGCTCATCAGAGGAAGATAATCGCGCCTGAATTGTACCTAGACAAGGTGAAGGCAATGGTTGATCAGATAGTTGATTCCACAAATATAATGCTAAGATCATGGGAGAGTATAATAGAAAGAGATGGAATAATTTCAGAGATTAAAATCGATGAAGATCTGCGAAGCTTGTCAGCTGACATAATTTCTAGAGCTTGTTTTGGGAGCAATTATGTTCAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAGGTCCTCTCCAAGATATATGCTGGAATTCCGGGATTTAGATACTTGCCAAACAAAAACAATAGACAGATATGGAGATTAGAGAAAGAGATTAACTCAAATATATCAAAGCTTGTAAAACAACGCCAAGAAGAAGGTCGTGAGCAAGATCTCTTGCAAATGATACTCGACGGTGCAAACAATTGTGAGGGAAGTGATGGCCTCTTACCAAATTCAGTTGCACGAGACAGGTTCATTATAGATAACTGCAAAAATATATTTTTTGCTGGACATGAAACTACTGCAATTACAGCATCTTGGTGCTTAATGTTGTTAGCTACATACCAAGATTGGCAAGATCGTGCTCGTGCAGAGGTGCTTGAAGTTTGCAGAAATGGTATTCCAGATGCAAGTATGCTTAGAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATCCACCATCAGCATTTGTTGTCAGAACAGCTTTACAAAATATAAACATGAAAGGTATCGAAGTTCCAAAAGGAATGAATATTCAGATTCCAATCTCAATATTGCAGCATGACATTGATCTTTGGGGCGCCGATGCCCACAAGTTCAATCCAGAAAGATTTGCGAATGGCGTGCTTGGAGCCTGCAAGATTCCACAAGCTTATATGCCATTTGGAATAGGTGCCCGGGTCTGTGCCGGACAGCATTTAGCCCTGGTAGAATTGAAGGTTATTTTGTCTCTCATTCTGTCAAAGTTTTGTTTCTCTCTTTCATCAAGTTACTGCCATTCAGCGGCCTTTCGTTTGGTTATAGTACCTGGTCATGGAGTTGTTCTTAAAATGACAAGAATTTGA 1557 0.3905 MSIVVEVVVALGAVLFGLIHFLHVLVLKPRSLRSKLHKQGIHGPSPHFYFGNIQEIKTLLLQQQESQAKQKDVCVSISHNWTSTLFPHIHKWTNQYGPIYLFSSGSIQWLMVADMEMVKEILLNTSLDLGKPSYLSKDMGPLLGQGILSSSGPIWAHQRKIIAPELYLDKVKAMVDQIVDSTNIMLRSWESIIERDGIISEIKIDEDLRSLSADIISRACFGSNYVQGKEIFTKLRDLQKVLSKIYAGIPGFRYLPNKNNRQIWRLEKEINSNISKLVKQRQEEGREQDLLQMILDGANNCEGSDGLLPNSVARDRFIIDNCKNIFFAGHETTAITASWCLMLLATYQDWQDRARAEVLEVCRNGIPDASMLRSMKTLTMVIQETLRLYPPSAFVVRTALQNINMKGIEVPKGMNIQIPISILQHDIDLWGADAHKFNPERFANGVLGACKIPQAYMPFGIGARVCAGQHLALVELKVILSLILSKFCFSLSSSYCHSAAFRLVIVPGHGVVLKMTRI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2455 518 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 513 - -
Tpr6g2455 518 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Tpr6g2455 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2455 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 513 - -
Tpr6g2455 518 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2455 Tpr-Chr6 26936820 26939629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2455 117 515 Cytochrome P450 AT5G24900 45.477 7.16e-129 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2455 K24544 - gmx:100780335 822.387