Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2444 ATGAGCATAGTTGTTGAAGTTGTGGTGGCTCTTGGAGCAGTTTTGATTGTATTGATCCATTTTTTGCATGTTTTAGTTTTGAGACCAAAATCACTAAGATCAAAGCTTCATAAGCAAGGGATTCATGGCCCTACTCCTCACTTCTACTTTGGTAATACCCTACAAATGAAGACCCTTGTACTTCAACAACAAGAATCACAAGCCAAACACAAACAACAAGAAGATGAAGATGTTTGTGTTTCTATATCTCATAACTGGACTTCAACTTTGTTCCCTCATATTCACAAGTGGAGAAATCAATATGGTCCCATATACTTGTTTTCTATTGGGAGTATACAAAGGTTAATGGTAACAGATATGGAGATGGTGAAGGAAATTATCCTAAACACCTCTTTGAATCTAGGAAAGCCTTCTTATCTTTCCAAAGATATGAGGCCACTCCTAGGCCAAGGTATGGTATCATCAAGTGGTCTCATTTGGGCTCATCAAAGGAAGATAATTGCTCCTGAATTGTACCTAGACAAGGTTAAGGCAATGGTTGATCAAATAGTTGATTCCACAAATATAATGATAAGATCTTGGGAGAGTAGAATAGAAAGAGATGGAGTAGTTTCCGAGATTAAAGTTGATGAAGATTTGCGAAGTTTGTCGGCTGATATAATTGCTAGAGCTTGTTTTGGGAGCAATTATGTCCAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCTAAAACTACTCTCAAAGATATATGTTGGAATTCCAGGCTTTAGATACTTGCCAAACAAAAGCAATAGCCAGATATGGAGATTAGAGAAAGAGATTAACTCGAACATATCAAAGCTCGTAAAACAACGCCAAGAAGAAGGTCGTGAGCAAGATCTCTTGCAAATGATACTCGAGGGTGCAAAGAACTGTGATGGAAATGATGGCCTCTTATCAAATTCAATCTCACGAGACAGGTTCATTATAGATAACTGCAAAACTATATTCTTTGCTGGACATGATACTACTTCAATTACAGCTTCATGGTGCTTAATGTTATTAGCTACATACCAAGATTGGCAAGATCGTGTTCGTGCAGAGGTGCTTGAAGTTTGTGGAAATGGTAATCCAGACGCAAGTAAACTTCGAAATATGAAAACGTTAACGATGGTGATTCAGGAGACTTTGAGGCTTTATTCACCGATAGTATTTGTTGAAAGAACCGCATTCCAAGATATTAACATAAAAGGTATCAAAGTTCCAAAAGGAATGAATATGCAGATTCCAATTCCAATTTTGCAGCATGACATTGATCTTTGGGGTCCCGATGCCCACAAGTTCAATCCAGAAAGATTTGCGAATGGCGTGCTTGGAGCCTGCAAGATTCCACAAGCTTATATGCCATTTGGAATAGGCGCTCGTGTCTGTCCCGGACAGCATTTATCCATGATAGAATTGAAGGTGATTTTGTCTCTCATTCTGTCAAAGTTTCGATTGTCTCTTTCATCAAGTTACTGTCATTCACCAGCCTTTCGGTTGCTTATAGAACCTGGTCAGGGAGTTGTTCTAAACACGACTAGAATTTAA 1572 0.383 MSIVVEVVVALGAVLIVLIHFLHVLVLRPKSLRSKLHKQGIHGPTPHFYFGNTLQMKTLVLQQQESQAKHKQQEDEDVCVSISHNWTSTLFPHIHKWRNQYGPIYLFSIGSIQRLMVTDMEMVKEIILNTSLNLGKPSYLSKDMRPLLGQGMVSSSGLIWAHQRKIIAPELYLDKVKAMVDQIVDSTNIMIRSWESRIERDGVVSEIKVDEDLRSLSADIIARACFGSNYVQGKEIFTKLRDLLKLLSKIYVGIPGFRYLPNKSNSQIWRLEKEINSNISKLVKQRQEEGREQDLLQMILEGAKNCDGNDGLLSNSISRDRFIIDNCKTIFFAGHDTTSITASWCLMLLATYQDWQDRVRAEVLEVCGNGNPDASKLRNMKTLTMVIQETLRLYSPIVFVERTAFQDINIKGIKVPKGMNMQIPIPILQHDIDLWGPDAHKFNPERFANGVLGACKIPQAYMPFGIGARVCPGQHLSMIELKVILSLILSKFRLSLSSSYCHSPAFRLLIEPGQGVVLNTTRI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2444 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 518 - -
Tpr6g2444 523 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 Gene3D Cytochrome P450 29 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Tpr6g2444 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 518 - -
Tpr6g2444 523 SUPERFAMILY Cytochrome P450 85 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2444 523 Pfam Cytochrome P450 91 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2444 Tpr-Chr6 26848197 26850623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2444 122 518 Cytochrome P450 AT5G24900 47.549 3.73e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2444 K24544 - gmx:100780335 791.186