Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2443 ATGAGCATAGCTGTTGAAGTTGTGGTGGCTCTTGGAGCAGTTTTGTTTGGATTGATTCATTTTTTGAATGTTTTGGTTTTGAGACCAAAATCACTAAGATCAAAGCTTCATAAGCAGGGTATTCATGGCCCTACTCCTCACTTCTACTTTGGTAATATCCAAGAAATGAAGACCCTTTTGCTCCAACAACAAGAATCACAAGCCAAACAAAAACAAGAAAAAGAAGATGAAGATGTTTGTGTTTCTATATCTCATAATTGGACTTCAACTTTGTTCCCTCATATTCACAAATGGAGAAAACAATATGGTCCTACATACTTGTTTTCTTCTGGGAGTGTACAACGGTTAATGGTGACAGATATGGAGTTGGTGAAGGAAATTCTCCTAAACACCTCTTTGAATCTAGGAAAACCTTCTTATCTTTCCAAAGATATGGGTCCACTCCTAGGCCAAGGTATAGTATCATCAAGTGGGCCTATTTGGGTTCATCAGAGGAAGATAATCGCGCCTGAATTGTACCCTGACAAGGTCAAGGCAATGATTGATCAAATAGTTGACTCCACATATATAATGGTAAGATCTTTGGAGAGTAGAATAGAAAGAGACGGAGTAGTCTCAGAGATTAAAATCGATGAAGATCTGCGAAGCTTGTCTGCTGACATAATTGCTAGAGTTTCTTTTGGGAGCAATTATGTCCAAGGGAAAGAAATATTCACAAAGATTGGAGATCTTCTAAAACTCCTCTCCAAAATATATATTGGAATTCCGGGCTTTAGATACTTGCCAAACGAAAACAATAGACAGATATGGAGATTAGAAAAAGAGATTAACTCAAATATATCAAAGCTTGTAAAACAGCGCCAAGAAGGAGGTCGTGAGCAAGATCTCTTGCAAATGATACTTGAGGGTGCAAAGAATTGTGAGGGCAGTGACAGCTTCTTATCAAGTTCAATCTCACAAGACAGGTTCATTATAGATAACTGCAAAACTATATTCTTTGCTGGACATGATACTACTTCAATTACAGCATCGTGGTGCTTAATGTTGTTAGCTACATACCAAGATTGGCAAGATTGTGCTCGTGCAGAGGTGCTTGAAGTTTGCGGAAATGGTATTCCAGATGCAAGTATGCTTAGAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATCCGCCAGCAGTATTTGTCACCAGAACAGCTTTACAAGATATTAACATAAAAGGTATCGAAGTTCCAAAAGGAATAAATATTCAGATTCCAATCTCAATATTGCAGCATGACACTGATATTTGGGGACCTGATGCCCTCGAGTTCAAACCAGAAAGATTTGCAAATGGCGTGATTGAATCCTGCAAGATTCCACAAGCTTATATGCCATTTGGAATAGGCTCCCGTGTCTGTCCCGGACAGCATTTATCCATGATAGAATTGAAGGTGTTTTTGTCTCTCATTCTGTCAAAGTTTCGCTTCTCTCTTTCATCTAGTTATGTTCATTCACCGGCCTTTCGGTTGCTTATAGCGCCTGGCAAGGGAGTTGTTCTCAATATGACAAGAATTTAA 1575 0.3886 MSIAVEVVVALGAVLFGLIHFLNVLVLRPKSLRSKLHKQGIHGPTPHFYFGNIQEMKTLLLQQQESQAKQKQEKEDEDVCVSISHNWTSTLFPHIHKWRKQYGPTYLFSSGSVQRLMVTDMELVKEILLNTSLNLGKPSYLSKDMGPLLGQGIVSSSGPIWVHQRKIIAPELYPDKVKAMIDQIVDSTYIMVRSLESRIERDGVVSEIKIDEDLRSLSADIIARVSFGSNYVQGKEIFTKIGDLLKLLSKIYIGIPGFRYLPNENNRQIWRLEKEINSNISKLVKQRQEGGREQDLLQMILEGAKNCEGSDSFLSSSISQDRFIIDNCKTIFFAGHDTTSITASWCLMLLATYQDWQDCARAEVLEVCGNGIPDASMLRSMKTLTMVIQETLRLYPPAVFVTRTALQDINIKGIEVPKGINIQIPISILQHDTDIWGPDALEFKPERFANGVIESCKIPQAYMPFGIGSRVCPGQHLSMIELKVFLSLILSKFRFSLSSSYVHSPAFRLLIAPGKGVVLNMTRI* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2443 524 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 519 - -
Tpr6g2443 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Tpr6g2443 524 SUPERFAMILY Cytochrome P450 87 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 Pfam Cytochrome P450 92 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 Gene3D Cytochrome P450 29 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 519 - -
Tpr6g2443 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2443 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2443 Tpr-Chr6 26842464 26845975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2443 123 521 Cytochrome P450 AT5G24900 45.610 6.05e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2443 K24544 - gmx:100780335 762.681