Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2428 ATGCTTCAAATCCAAGGCTACCTAGTATTATTTCTTTTATGGTTCATTTCAACTATTTTCATTAGATCACTTTTCAAAAAATCTGAGTATTATAAATTACCACCTGGTCCCCCAATTTCATTACCAATTTTAGGACATGCACCTTATCTTAGATCACTTCTTCATAAATCACTTTACAATCTATCAATTCGTTATGGCCCTTTAATGCATATCATGCTCGGTTCACAACATGTCATAGTTGCATCTTCAGCTGAAAGTGCTAAACAAATATTGAAAACTTGTGAAGAGTCTTTTATCAATAGACCAATTATGATTGCTAGTGAAAATTTAACATATGGTGCAGCTGATTATTTTTTCATACCTTATGGTACTTATTGGAGGTTTCTTAAGAAGCTTTGTATGACAGAGCTTCTTAGCGGGAAAACTCTCGAACACTTTGTTAGTATTCGAGAGGATGAAATTAAGTGTTTTTTAGGTACCCTTTTGGAAACATCTAAAAGTGGTAAGCCTATTGAAATGAGGCATGAACTTATTAGACATACTAATAATATCATTTCTAGAATGACCATGGGAAAAAAGAGTAATGGTATGAATGATGAAGTTGGTGAGTTGAGAAAAGTGATTAGGGAAATTGGTGAACTTCTTGGTGCATTTAATTTAGGTGATATTATTGGATTTATGAGACCATTTGATTTACAAGGATTTGGAAAAAGAAATAGAGATACACATCATAAGATGGATTTAATGATGGAGAAAGTGTTGAAGGAACATGAAGAGGTTAGAGCAAAAGAAGGTGATGGTAGTGATAGAAAGAAGGATCTGTTTGATATTTTGTTGAACTTGATTGAAGCTGATGGAAGTAAACTCACTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATGTTCATTGCAGGAACAAATGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAACTAATAAGAAATCCACATGTTTTCAAGAAAGCAAGAGAAGAAATTGATTCTGTTGTTGGTAAAGAAAGACTTGTTAAAGAATCAGATATACCAAATTTACCTTATCTTCAAGCAGTAGTTAAAGAAACTCTTAGAATGCATCCACCAACTCCAATATTTGCAAGAGAAGCTATAAGAAGTTGTCAAGTTGATGGATATGATGTACCAGAACATTCAAAGATTTTCATCAATGCTTGGGCTATTGGTAGAGATCCTAACTATTGGGACAATCCATTAGTCTATGACCCTGAAAGATTCTTCGTCAATGATGATCCTAACAAGAGTAAAATTGATGTTAGAGGACAATATTATCAACTTTTGCCATTTGGTAGTGGGAGAAGAAGTTGTCCTGGTGCTTCACTTGCTTTGCTTGTTATCCAAGCAACACTTGCTAGTTTGATACAATGCTATGATTGGGTTGTTAATGATGGTAAGGATCATGATCTTGATATGTCGGAAGTAGGAAGGGTTACTGTGTTTTTGGCAAATCCACTCAAATGCAAGCCTGTTCCACATTTTGTTCCATTCTCTGCTTGA 1533 0.3483 MLQIQGYLVLFLLWFISTIFIRSLFKKSEYYKLPPGPPISLPILGHAPYLRSLLHKSLYNLSIRYGPLMHIMLGSQHVIVASSAESAKQILKTCEESFINRPIMIASENLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVSIREDEIKCFLGTLLETSKSGKPIEMRHELIRHTNNIISRMTMGKKSNGMNDEVGELRKVIREIGELLGAFNLGDIIGFMRPFDLQGFGKRNRDTHHKMDLMMEKVLKEHEEVRAKEGDGSDRKKDLFDILLNLIEADGSKLTRQSAKAFALDMFIAGTNGPASVLEWALAELIRNPHVFKKAREEIDSVVGKERLVKESDIPNLPYLQAVVKETLRMHPPTPIFAREAIRSCQVDGYDVPEHSKIFINAWAIGRDPNYWDNPLVYDPERFFVNDDPNKSKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCYDWVVNDGKDHDLDMSEVGRVTVFLANPLKCKPVPHFVPFSA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2428 510 Pfam Cytochrome P450 34 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PANTHER BETA-AMYRIN 24-HYDROXYLASE 2 509 - -
Tpr6g2428 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tpr6g2428 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2428 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2428 Tpr-Chr6 26736701 26740993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2428 1 502 Cytochrome P450 AT5G06900 39.764 4.38e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2428 K24188 K15814 gmx:100037459 842.417