Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2421 ATGTGTGATCCGCGTGCAAGTATACTTTCATGTGCTCGCGAAAACTTGGTTCCACTAGCCCGCAAACATTTGCTTCCACTTGCCATTGATCATTTGCTTCCAATACTTAAGGAAGCAGTCAACATGATTAGGGGTGTCCCAAATGATGAAATTACACACATGAAACATGAACTCGAAAGCATTGAAGACGCCATCCATGAAGCAGATAAAATGGCTGATGCTGAAGGCGCCAACCCAAGTGATGGAACCAGAGAAAAGATCAACCAGCTGATAGAAGCATCTTTTCGCATACAAGATCTCATTGATGAATACATCATCCGTGAGGAGCAACAACTTCCGGATCCTGGATGTGCTGGTGGTGGTTCTGACTATGTCAAAACTAAGATTCTCCGTCTTCAAATAGCCCATGATATTCAGAACATCAAATCCCGAATTCGTGAAATAAAAGAAGATACAAGTTCTGAAACGGATCATGAAGGATCAAGCAGTTCTATTACAAACCCGAATGCCACATTATTGCAGAACCTTCGAAAGGCTCCTTTTTACATGAAGGAAGCTGATGTTGTCGGCTTTGAAAAGCCAAGAGACAAATTGGTTGATTGGCTGGTAAAGGGAAGAGATGAGCTCACAGTCGTCTCCGTGGTAGCAATGGGAGGGCAAGGAAAAACCACTCTTGCTAGAAAAGTTTTTGAGAGCAAAGAGGTCGTGGGATGCTTTGAATATCGTATATGGATCACAGTGTCACAATCATACAATATAGAAGAGTTGCTGAGAGGCATCTTGAAGGATCTTTGCGAACAACAAAAAGTCAATCCTCCTCAAATGATTCATGAAATGAATAAAGAGTCATTAGTGAAAATAGTGAGAAACTACTTGCAGGAGAAAAGGTACGTTGTAGTTTTTGATGATGTATGGAACTCATCTTTTTGGGCTGATATTAAATTTGCTATGATTGATAAACAAAAAGGTTGTAGGATATTAATCACCACTAGGATCATGGATGTTGCCACTTCCTGTAGGGAATCTTCTTTTGTTGAAATTCATGAACTGAAAGGTCTAGATCATGAACAATCATTAAAATTGTTCAATAAGAAGGCATTTTATGACTTGAACGGATGTTGTCCGGAAAATCTTGTTCATATATCTTCTAAAATTGTTGAAAAATGTAATGGATTGCCACTAGCAATTGTAGTCACCGGCGGTCTTTTATGCAAAAATAGAAATACAATTGAATGGTATAAGTTTAATGAAAATATCAAGCCAAAGTTAAAGAAAGATTCTTTGATAAACAAAATTTTAGTTCTCAGTTACCATGATTTGTCTTACAATCTCAAGTCATGTCTGTTATATTTTGGAATGTATCCTGAAGATTGTAAAGTTAATTCAGAGAGACTAATTCGGCAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGAATGACTTTGGAAGAGGTTGCAGAAGGATACTTAACAGAATTAATTCATAGAAGTTTGGTGCAAGTAGTTTCAATCAACATTGGCGGAAGAGCAAAAAGGTGTCGTGTTCATGATCTAGTGCATGATATGATCCTTAAAAAAATTGAGGATTTAAGTTTTTGCAAGAATATTAGTGAGGATGGGCAATCAACTTCAAATGGAATAGTTCAACGCCTATTAATAACAACCAATTCGGATAATTTAATGGAAAATATTGAAAGCTCACATGTTCGATCACTGATCGTTCTCAAACCTTACACATTACATGAATCTGTTGTAAGGAAAATTACTACAAAATACAGGTTTTTGAAGGTGTTTGATGCTGAACTTGCTGGAGAAATTGAAGTTCCTGAAGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTATCAAGGCATTTGAACAGGAAACTGAACTTCCACAATCCATTGGCATGCTTGAGAACCTAGAGACCTTGGATTTAACAGGTGCATCAGTCCTTGATTTTCCCAAAGAAATTTGTAAACTTAGAAAGTTAAGACATTTTCTAGGCAACCTAATGTATTTGGTTGAACTGAAGGATGGTATTGGAGACATGACATCCCTACAAACTCTATGGAAGGTATATTTAAATGACAATGATGAAGACATAGAGTTAATCGAAGAGCTAGGAAAACTGAAGCAACTAAAGAAATTGGGCTTGGAAGGTGTCGGGAAAAAACATACGAGTGTTTTATCTTCCTCAATCAATAAGATGCAACAAATGGAAAAACTATCTATTAAATCACACGAATCAGACGAATACATTGATTTGGATTTGGATTTACCTAAGCTTCAATATCTTGTACTGGAAGGTCAGTTGGAGAAGTTACCGGAGTGGATTGAAAAGAATCAAAATCTTGTTAAACTGAAGCTTGTTTCATCCAAGCTACCCGAGGATTCAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTCTATTTCTCTCATTGAAAATGCTTATGTAGGTGAAACCTTACATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTATATCTTGAGAATTTGGATAACTTAAAAGACATCCTTATTGACCAAGGTGCGTTGCCTTCTCTGAGAAAGTTCCACATACACTCATTTTCAGTCCTCCAGCTCAAGACGATACCAACCGACATTCAACACTTAAAGAAGCTTGAAGATCTCAGGATTAGTGTTGTGTGTGACAAATTTATGCAGAACCTTTTACTCAATGGAGGAAAAGACCATTGGATCTTCAAGCAAGTGCCCTTTGTAGAAATTAAAGATCGGCGTGAATTGTAG 2784 0.3707 MCDPRASILSCARENLVPLARKHLLPLAIDHLLPILKEAVNMIRGVPNDEITHMKHELESIEDAIHEADKMADAEGANPSDGTREKINQLIEASFRIQDLIDEYIIREEQQLPDPGCAGGGSDYVKTKILRLQIAHDIQNIKSRIREIKEDTSSETDHEGSSSSITNPNATLLQNLRKAPFYMKEADVVGFEKPRDKLVDWLVKGRDELTVVSVVAMGGQGKTTLARKVFESKEVVGCFEYRIWITVSQSYNIEELLRGILKDLCEQQKVNPPQMIHEMNKESLVKIVRNYLQEKRYVVVFDDVWNSSFWADIKFAMIDKQKGCRILITTRIMDVATSCRESSFVEIHELKGLDHEQSLKLFNKKAFYDLNGCCPENLVHISSKIVEKCNGLPLAIVVTGGLLCKNRNTIEWYKFNENIKPKLKKDSLINKILVLSYHDLSYNLKSCLLYFGMYPEDCKVNSERLIRQWIAEGFVKEEEGMTLEEVAEGYLTELIHRSLVQVVSINIGGRAKRCRVHDLVHDMILKKIEDLSFCKNISEDGQSTSNGIVQRLLITTNSDNLMENIESSHVRSLIVLKPYTLHESVVRKITTKYRFLKVFDAELAGEIEVPEDLGSLNHLKYFSIKAFEQETELPQSIGMLENLETLDLTGASVLDFPKEICKLRKLRHFLGNLMYLVELKDGIGDMTSLQTLWKVYLNDNDEDIELIEELGKLKQLKKLGLEGVGKKHTSVLSSSINKMQQMEKLSIKSHESDEYIDLDLDLPKLQYLVLEGQLEKLPEWIEKNQNLVKLKLVSSKLPEDSMKLLKSMPNLLSISLIENAYVGETLHFQNEWFKNLKELYLENLDNLKDILIDQGALPSLRKFHIHSFSVLQLKTIPTDIQHLKKLEDLRISVVCDKFMQNLLLNGGKDHWIFKQVPFVEIKDRREL* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2421 927 Pfam NB-ARC domain 192 425 IPR002182 GO:0043531
Tpr6g2421 927 PANTHER - 52 891 - -
Tpr6g2421 927 Pfam Rx N-terminal domain 28 111 IPR041118 -
Tpr6g2421 927 PRINTS Disease resistance protein signature 211 226 - -
Tpr6g2421 927 PRINTS Disease resistance protein signature 291 305 - -
Tpr6g2421 927 PRINTS Disease resistance protein signature 389 403 - -
Tpr6g2421 927 PRINTS Disease resistance protein signature 638 654 - -
Tpr6g2421 927 SUPERFAMILY L domain-like 515 892 - -
Tpr6g2421 927 Gene3D - 352 436 IPR042197 -
Tpr6g2421 927 Gene3D - 26 150 - -
Tpr6g2421 927 MobiDBLite consensus disorder prediction 149 169 - -
Tpr6g2421 927 PANTHER DISEASE RESISTANCE PROTEIN RP 52 891 IPR044974 GO:0006952
Tpr6g2421 927 Gene3D - 437 528 IPR036388 -
Tpr6g2421 927 Gene3D Ribonuclease Inhibitor 555 904 IPR032675 -
Tpr6g2421 927 CDD RX-CC_like 27 150 IPR038005 -
Tpr6g2421 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 451 IPR027417 -
Tpr6g2421 927 Gene3D - 169 347 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2421 Tpr-Chr6 26663183 26666420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2421 208 400 WRKY Transcription Factor Family AT5G45050 29.442 3.27e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2421 K13457 - gmx:100819372 746.503