Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2420 ATGGGAAAAATTGAACTAGTTGAAAAACTAGTGATAGCTCCTGATCAACCAACACCCTCTAAGAGAATGTTCTTGTCAAATATTGATTTGTCCCTTGTTGTATACCAAGATTCTGCCTCTTTCTTTGATCCTCCAACCAACCAAATGTGCTTTTCTGAGATTTGTAGCAAATTATATAATTCACTTGGTAAAATGCTTGTGCATTATGGTTTTATGGCCGGCCGGCTTGTACCGAGTTTGGAAGAGAAAAATCGATTTGAAATTGATTGTAATGATGCCGGTATTGTTGTTGCTGCTGCAAAAACGGATAGAAAGTTAAGTGAATTTGGTATTATTTCAGCACCTAATCCTGAGTTAAAGGAATTGGTTGTTTTCTTGCTTGAAGAGGGTGATGAAGAAACTGACCTTAAAGAATTTCCACTTGCTTCCTTACAGCTTACACAATTTGGATGTGGAAGTTTAGCACTAGCTTCTCATTACAATCATTGCATACTCGACGGTATAGCAGTAAGAGAATTCGAGGCAAATTTGGCATCTCTAACACGCGGAGACGATTTCATCATAGTACCTAATGCAGACAGAACACTACTGAGAGCTCGAAATCCACCAAAAATAAGTCATCCACATTTTGAATACTCAAAATCTACAAACACAGAAAATTTGTTCACAATACGTGGAACAACTAGCACCAATGTTAAAAAAACCTTTGTAGAGAATCAAATTCATGTACTTCATTTATCACCACAAAAAATTGCAAGCTTAAAAAAGAAAGCTTTAGAGAACATAACATTAAAAAACATCACAACATTTCAAGTTGTCGCTGCAAAAATATGGAAAGCGAGAAGCATAGCGACAAAGATGTCAGAGGAGAAAGTGTCAACAATATTGTTTCCAGTTGATGTTAGAAAAAAGGTTGTTCCCGAACTTCCAAACGGGTTTGCAGGAAATGCATTAGTTCCTGGCTTTGCGAGAGCAACTGTTAAGGAACTTATGGAACTAGAAGATGATTTTGTTATACGGAAAGTGCAAGAAGGGATTGAAAGATTGAATGACGAGTATATTAAATCGGGAATAGATTGGTTAGAATTGAATAGAGGCGTGCCTTGTAAGGAAGATAGTTTCTCTTTGGTGGCATGGTGGAGATTGGGATTAGAGAGTGAGATATTTGCTTGGGGTAGATTGAAATGTGCTACTCCACTTATAGTTAAGCCTGGTTTGGTTATGTTGTTGCCAGGAACAAAAGATGAAGGGGGGATTAATATATGTTTGAGTTTACCTCAAGATCAATTGCAAGAGTTTTGTAGGATAATGTTAGAAACTTAG 1323 0.3696 MGKIELVEKLVIAPDQPTPSKRMFLSNIDLSLVVYQDSASFFDPPTNQMCFSEICSKLYNSLGKMLVHYGFMAGRLVPSLEEKNRFEIDCNDAGIVVAAAKTDRKLSEFGIISAPNPELKELVVFLLEEGDEETDLKEFPLASLQLTQFGCGSLALASHYNHCILDGIAVREFEANLASLTRGDDFIIVPNADRTLLRARNPPKISHPHFEYSKSTNTENLFTIRGTTSTNVKKTFVENQIHVLHLSPQKIASLKKKALENITLKNITTFQVVAAKIWKARSIATKMSEEKVSTILFPVDVRKKVVPELPNGFAGNALVPGFARATVKELMELEDDFVIRKVQEGIERLNDEYIKSGIDWLELNRGVPCKEDSFSLVAWWRLGLESEIFAWGRLKCATPLIVKPGLVMLLPGTKDEGGINICLSLPQDQLQEFCRIMLET* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2420 440 Gene3D - 225 437 IPR023213 -
Tpr6g2420 440 Gene3D - 2 214 IPR023213 -
Tpr6g2420 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 439 - -
Tpr6g2420 440 Pfam Transferase family 3 433 - -
Tpr6g2420 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2420 Tpr-Chr6 26659665 26661327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2420 3 439 Monolignol Biosynthesis Gene Families AT5G48930 26.549 4.23e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2420 K15400 - gmx:100801822 716.457