Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2385 ATGGCATCAAATAAAGAAGAGGTAAGGCTATTTGGAATGGTGCAAAGTCCATTTGCATCAAGGGTGGAGATTGCTCTAAAATTGAAGGAAGTTGAATACAAATATGAAGAAGAAAAGTGGGGGAACTTTAGTGATACACTAATCAAATATAACCCAGTTTATAAAAAGGTTCCAGTTTTTGTTCACAATGACAAGCACTTATCAGAATCACTTGTGATTCTTGAGTACATTGATGAAACTTGGAAACAAAATCCCATTTTGCCTTCCGATCCTTACAAAAGAGCCTTGGCTCGTTTATCGTCCAATTTCATTGATGACAAGTGTTTCAATGGTGTACGCAAAGCTGTTTTCACTCTTGATGAAAAAGAACAAGAGAAGAGTATTGAGGAAATAGAAGTGGTTCTTCAATTTCTTGAGAATGAGCTCAAAGACAAATTCTTTGGTGGAGAGAAAATTGGTCTTGTTGACATTAGTGCTGTGTTTATAGCTTATTGGATCCCAATTATACAAGAAGTGAAAAGAATAAAATTGTTCAACTTTGAGAAATTTCCCAAGCTTTACAATTGGAGTCAAGACTTCAATAATCATCCAATTGTTAAAGAAAAATTGCCAACTAGAGAAAACCTTTTGGCCTTCTACAAAGTGTTGTTTCTTCAAAAAAAAAAAATTGAAGCTCTGATTAATATGGCATCTCATCAGGAAGAGGTGAAGCTTTTTGGATTGGTGGAAAGTCCATTTGTAACAAGGGTGAAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATATGAACAAGAAAAGTGGGGAAACCTTAGTGATACACTAATCCAATACAATCCTGTATATAAGAAAGTTCCAGTTTTAGTTCATAAAGGAAAACCCATATCAGAATCCCTTGTGATTCTTGAGTATATTGATGAAACTTGGACACAAAATCCAATTTTGCCTTCTGATCCTTACAAAAGAGCTTTAGCTCGTTTCTGGTCCAAGTTCATTGATGACAAGTGTTTTAGTGTTGTACGAAAAGTTGTTTTCATTATTGATGAAAAAGAACGTGAGAAGAGTATTGAGGAAATGGAAGTGGGTCTTCAATTTCTTGAGAATGAACTCAAGGACAAATTCTTTGGTGGAGAAGAGATTGACATTGTTGACATTACTGCAGCCGGCATAGCTTTACATGAAGTAATGGGATTGAATTTGTTCACTAGTGAAAAATTTCCCAAACTTTATAAATGGTGCCAAGACTTCAACAACCACCCAATTGTCAAACAAAAATTGCCACCTAAAGAAAGACTGTTGGCCTTCTACAAAGCTCGTTTAGAAAATCTTGTTGCTTCAAAATAG 1344 0.3504 MASNKEEVRLFGMVQSPFASRVEIALKLKEVEYKYEEEKWGNFSDTLIKYNPVYKKVPVFVHNDKHLSESLVILEYIDETWKQNPILPSDPYKRALARLSSNFIDDKCFNGVRKAVFTLDEKEQEKSIEEIEVVLQFLENELKDKFFGGEKIGLVDISAVFIAYWIPIIQEVKRIKLFNFEKFPKLYNWSQDFNNHPIVKEKLPTRENLLAFYKVLFLQKKKIEALINMASHQEEVKLFGLVESPFVTRVKIALKLKGVEYKYEQEKWGNLSDTLIQYNPVYKKVPVLVHKGKPISESLVILEYIDETWTQNPILPSDPYKRALARFWSKFIDDKCFSVVRKVVFIIDEKEREKSIEEMEVGLQFLENELKDKFFGGEEIDIVDITAAGIALHEVMGLNLFTSEKFPKLYKWCQDFNNHPIVKQKLPPKERLLAFYKARLENLVASK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2385 447 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Tpr6g2385 447 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Tpr6g2385 447 Pfam Glutathione S-transferase, N-terminal domain 235 307 IPR004045 -
Tpr6g2385 447 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Tpr6g2385 447 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 229 441 IPR045073 -
Tpr6g2385 447 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 318 435 IPR010987 -
Tpr6g2385 447 SUPERFAMILY GST C-terminal domain-like 307 442 IPR036282 -
Tpr6g2385 447 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 234 313 IPR004045 -
Tpr6g2385 447 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Tpr6g2385 447 Gene3D Glutaredoxin 229 317 - -
Tpr6g2385 447 Gene3D Glutaredoxin 1 89 - -
Tpr6g2385 447 SUPERFAMILY Thioredoxin-like 236 336 IPR036249 -
Tpr6g2385 447 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Tpr6g2385 447 CDD GST_N_Tau 236 309 - -
Tpr6g2385 447 SFLD Main (cytGST) 233 444 - -
Tpr6g2385 447 Gene3D - 90 223 - -
Tpr6g2385 447 Gene3D - 318 447 - -
Tpr6g2385 447 Coils Coil 349 369 - -
Tpr6g2385 447 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 229 441 - -
Tpr6g2385 447 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 219 - -
Tpr6g2385 447 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Tpr6g2385 447 SFLD Glutathione Transferase (cytosolic) 4 217 IPR040079 -
Tpr6g2385 447 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Tpr6g2385 447 CDD GST_C_Tau 319 439 IPR045074 GO:0004364|GO:0006749
Tpr6g2385 447 Pfam Glutathione S-transferase, C-terminal domain 119 197 IPR004046 -
Tpr6g2385 447 Pfam Glutathione S-transferase, C-terminal domain 347 420 IPR004046 -
Tpr6g2385 447 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Tpr6g2385 447 SFLD Main.3: Omega- and Tau-like 233 444 IPR045073 -
Tpr6g2385 447 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2385 Tpr-Chr6 26139960 26144848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2385 231 446 Glutathione S-transferase Gene Family AT3G09270 48.661 3.38e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2385 K00799 - egt:105969932 383.645