Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2384 ATGGCATCAAATCAGGAAGAAGAGGTGAAGCTTTTTGGAGTTGTGCCAAGTCCATTTGTAACTAGAGTTGACATAGCTCTAAATTTGAAGGGAGTTCAATACAAATTTGTGGAAGAAAACTTAGGAAATTTTAGTGATACACTAATCAAATACAACCCTGTTCATAAGAAAGTCCCTGTATTAGTTCACAATGGAAAACCCATATCAGAATCTCGTGTGATTCTTGAGTATATTGATGAAACTTGGAAGCAAAATCCAATTTTACCTTCTGATCCATACAAAAGAGCCTTGGCTCGATTCTGGTCCAATTTCATTGATGATAAGTTTTTGAGTGCTGTAAGGAAATGGAAAGAAAACAATGAAGAGAGTATTGAAGAAATGGAAGTGGCTTTTCAATTTCTTGAGAATGAGCTCAAGGACAAATTCTTTGGTGGAGAAGAGATTGGCATTGTTGACATCACTGCAGTTTTCATAGCTTATTGGTTCCCTATTATACAAGAAATAATAGGATTGAAGTTGTTCACTAGTGAGAAATTTCCAAAGCTTTACAAATGGAGCCAAGACTTCACCAATCACCAAGTTGTCAAGGAAAAATTACCTAACAGAGAAACATTGTTTGCCTACTTTACAGCTCGTATGGAAACTAAGATGGCATCAAATCAGGAAGAGGTTAAGGTTTTTGGAATGTTGGCAAGTCCATTTGTGAGCAGAGTGGAGATTGCTCTAGGATTGAAGGGAATTGAATACAAATATCAAGAAGAAGAGTTTGGGAACTTGAGTGATACACTCTTCAAATATAATCCAGTTTATAAGAAAGTTCCTGTTTTAGTTCATAATGATAAGCCCATATCAGAATCACTTGTGATTGTTGAGTATATTGATGAGACTTGGAAACAAAATCCAATCTTACCTTCTGATCCTCACAAAAGAGCTTTGGCTCGTTTCTGGTCCAATTTCATAGATGACAAGTATATGAATGCTCTAGGGAAAGTTCTTTACACTCATGATGAGAAAGAACGTGAGAAGTGCATTGAGGAATCTGAAGTAGCTCTTCAATTTCTTGAGAATGAGCTCAAGGACAAATTCTTTGGTGGGAAAGAGATTGGCCTTGTTGACATTACTGCAGTCTTCATAGCTTTTTGGCTTCCTATTGTACAAGAAGTAATGGGACTAAAGTTGTTCAACAATGAGAAATTTCCCAAGCTTTACAATTGGAGTCAAGACTTCAACAACCACCCAATTGTTAAAGAAAAATTGCCTTCTAGAGAAAGCCTTTTGGCCTTCTACAAAGCTCGTTTTGCCTCCTAG 1308 0.367 MASNQEEEVKLFGVVPSPFVTRVDIALNLKGVQYKFVEENLGNFSDTLIKYNPVHKKVPVLVHNGKPISESRVILEYIDETWKQNPILPSDPYKRALARFWSNFIDDKFLSAVRKWKENNEESIEEMEVAFQFLENELKDKFFGGEEIGIVDITAVFIAYWFPIIQEIIGLKLFTSEKFPKLYKWSQDFTNHQVVKEKLPNRETLFAYFTARMETKMASNQEEVKVFGMLASPFVSRVEIALGLKGIEYKYQEEEFGNLSDTLFKYNPVYKKVPVLVHNDKPISESLVIVEYIDETWKQNPILPSDPHKRALARFWSNFIDDKYMNALGKVLYTHDEKEREKCIEESEVALQFLENELKDKFFGGKEIGLVDITAVFIAFWLPIVQEVMGLKLFNNEKFPKLYNWSQDFNNHPIVKEKLPSRESLLAFYKARFAS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2384 435 Gene3D Glutaredoxin 219 305 - -
Tpr6g2384 435 Gene3D Glutaredoxin 2 90 - -
Tpr6g2384 435 SUPERFAMILY GST C-terminal domain-like 80 214 IPR036282 -
Tpr6g2384 435 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Tpr6g2384 435 SFLD Glutathione Transferase (cytosolic) 220 433 IPR040079 -
Tpr6g2384 435 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Tpr6g2384 435 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 222 301 IPR004045 -
Tpr6g2384 435 CDD GST_N_Tau 9 82 - -
Tpr6g2384 435 Pfam Glutathione S-transferase, C-terminal domain 334 413 IPR004046 -
Tpr6g2384 435 Pfam Glutathione S-transferase, C-terminal domain 101 191 IPR004046 -
Tpr6g2384 435 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 217 IPR010987 -
Tpr6g2384 435 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Tpr6g2384 435 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 306 433 IPR010987 -
Tpr6g2384 435 SUPERFAMILY Thioredoxin-like 224 324 IPR036249 -
Tpr6g2384 435 CDD GST_N_Tau 224 297 - -
Tpr6g2384 435 Gene3D - 91 218 - -
Tpr6g2384 435 Gene3D - 306 435 - -
Tpr6g2384 435 CDD GST_C_Tau 92 212 IPR045074 GO:0004364|GO:0006749
Tpr6g2384 435 Pfam Glutathione S-transferase, N-terminal domain 223 295 IPR004045 -
Tpr6g2384 435 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Tpr6g2384 435 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 5 214 - -
Tpr6g2384 435 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 217 432 - -
Tpr6g2384 435 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Tpr6g2384 435 SFLD Main.3: Omega- and Tau-like 220 433 IPR045073 -
Tpr6g2384 435 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
Tpr6g2384 435 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 217 432 IPR045073 -
Tpr6g2384 435 SUPERFAMILY GST C-terminal domain-like 295 433 IPR036282 -
Tpr6g2384 435 CDD GST_C_Tau 307 432 IPR045074 GO:0004364|GO:0006749
Tpr6g2384 435 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2384 Tpr-Chr6 26131670 26136924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2384 220 435 Glutathione S-transferase Gene Family AT3G09270 53.636 2.72e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2384 K00799 - egt:105969932 421.779