Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2382 ATGATTCATCTATTAGTTGCCAAAGTCAAGAGAGTGTTGCAAGGCTGTGGTGCAATAGCTACAAATCAGGCTGATGTGAAGCTTTTGGGATTTACAGGAAGCCCATTTGTGTGCAGGGTACAGATTGCTCTAAAGTTGAAGGAAATTGAATACAAATATGTTGAAGAAAATTTGGGCAATAAAAGTGATCAACTTATCAAATATAATCCGGTTTATAAAAAGGTTCCAGTTTTTGTTCACAATGATAAGCCCATATCAGAATCACTTGTGATTCTTGAGTACATTGATGAGATTTGGAAACAAAATCCAATTTTGCCTAATGATCCTTATCAAAGAGCAATGGTTCGTTTCTGGTCCAAGTTCATAGATGACAAGATTGTCGCAGCTTCATTTAAATCGGTATTCACAGTTGATAAGAAAGAGCGCGAGAAGAATATTGAAGAATCAACTGAGGCTCTAAAGATACTTGAGAATGAGCTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTAACTTTGTGGATATTGCTGCTGTCTTCATTGCTTTTTGGATCCCTTTGATTCAAGACATAGCAGGGTTGAAATTGTTCACTAATGAAAAGTTTCCAAAGCTTTACAATTGGAGTCAAGAAATTCTCAACCATCCTGCTGTGAAGGAAAATCTTCCTCCTAGAGACCCTATTTTTGCCTTTTTGAAAGCTCGCTATGATGGCCTTCTTGCTGCTTCAAAATAG 732 0.373 MIHLLVAKVKRVLQGCGAIATNQADVKLLGFTGSPFVCRVQIALKLKEIEYKYVEENLGNKSDQLIKYNPVYKKVPVFVHNDKPISESLVILEYIDEIWKQNPILPNDPYQRAMVRFWSKFIDDKIVAASFKSVFTVDKKEREKNIEESTEALKILENELKDKFFGGEEINFVDIAAVFIAFWIPLIQDIAGLKLFTNEKFPKLYNWSQEILNHPAVKENLPPRDPIFAFLKARYDGLLAASK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2382 243 CDD GST_C_Tau 109 234 IPR045074 GO:0004364|GO:0006749
Tpr6g2382 243 Gene3D Glutaredoxin 19 107 - -
Tpr6g2382 243 Pfam Glutathione S-transferase, N-terminal domain 25 97 IPR004045 -
Tpr6g2382 243 SFLD Main.3: Omega- and Tau-like 22 241 IPR045073 -
Tpr6g2382 243 Coils Coil 139 159 - -
Tpr6g2382 243 CDD GST_N_Tau 26 99 - -
Tpr6g2382 243 Gene3D - 108 242 - -
Tpr6g2382 243 SUPERFAMILY Thioredoxin-like 25 126 IPR036249 -
Tpr6g2382 243 SFLD Main (cytGST) 22 241 - -
Tpr6g2382 243 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 103 IPR004045 -
Tpr6g2382 243 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 108 230 IPR010987 -
Tpr6g2382 243 SUPERFAMILY GST C-terminal domain-like 97 236 IPR036282 -
Tpr6g2382 243 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 22 238 IPR045073 -
Tpr6g2382 243 Pfam Glutathione S-transferase, C-terminal domain 133 215 IPR004046 -
Tpr6g2382 243 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 22 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2382 Tpr-Chr6 26114886 26116214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2382 22 240 Glutathione S-transferase Gene Family AT3G09270 50.000 3.31e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2382 K00799 - gmx:100806714 356.295