Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2379 ATGATTCATAAATTAGTAGAATTAGTAGCCAAAGTTAAGAGAGTGTTACAACGCTGGGGTGTTATTTCTGCATCTAAGGAAGAGGTGAAGCTTTTGGGGTCTGTGGGAAGCCCATTTGTGATAAGAGTTCAAATTGCCCTGAAATTGAAGGGTATTGAGTACAAATATGTGGAAGAAAAATTGGGTTATTTAAGTGAAACACTTCTCAATTACAATCCAGTTTATAGGATGGTTCCTGTTTTTGTTCATAATGGGAAGCCTATCTCAGAATCTCGTGTGATTCTTGAGTATATTGATGAAACTTGGAAACAAAATCCTATCTTGCCTAATGATCCTTATCAAAGAGCATTGGCTCGTTTTTGGTCCAAGTTCATTGATGATAAGTGTGTGGCTGCTGCATGGAAATCTGTTTTTATGCCTAATGAGAAAGAACGTTCTCAGGCTAGTAAAGAATTATTGGAGGCTTTGCAATTTCTTGAGAAGGAGTTGAAAGACAAGTTCTTTGGAGGGAAAGAGATTGGTTTTGTGGATATTGCTGCTCTCTTTATCCCTTTATTCCAAGAAGTTGCAGAGTTTCAGTTATTCACCAGTGAAAAATTTCCTAAGCTATACAAATGGAGTCAAGAATTTTACAACAATCCAATAGTCAAGGAAATTATGCCTTCAAAAGATCAACAATTTGCTTATTTCAAAGCTCGTGCCGAGAGCCTTGCGGCTCCATCAAAATAG 729 0.3717 MIHKLVELVAKVKRVLQRWGVISASKEEVKLLGSVGSPFVIRVQIALKLKGIEYKYVEEKLGYLSETLLNYNPVYRMVPVFVHNGKPISESRVILEYIDETWKQNPILPNDPYQRALARFWSKFIDDKCVAAAWKSVFMPNEKERSQASKELLEALQFLEKELKDKFFGGKEIGFVDIAALFIPLFQEVAEFQLFTSEKFPKLYKWSQEFYNNPIVKEIMPSKDQQFAYFKARAESLAAPSK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2379 242 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 25 236 IPR045073 -
Tpr6g2379 242 SFLD Main.3: Omega- and Tau-like 25 239 IPR045073 -
Tpr6g2379 242 CDD GST_N_Tau 29 102 - -
Tpr6g2379 242 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 111 230 IPR010987 -
Tpr6g2379 242 CDD GST_C_Tau 112 233 IPR045074 GO:0004364|GO:0006749
Tpr6g2379 242 Gene3D - 111 240 - -
Tpr6g2379 242 SFLD Main (cytGST) 25 239 - -
Tpr6g2379 242 Pfam Glutathione S-transferase, C-terminal domain 129 214 IPR004046 -
Tpr6g2379 242 Gene3D Glutaredoxin 22 110 - -
Tpr6g2379 242 Pfam Glutathione S-transferase, N-terminal domain 28 100 IPR004045 -
Tpr6g2379 242 SUPERFAMILY Thioredoxin-like 29 129 IPR036249 -
Tpr6g2379 242 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 106 IPR004045 -
Tpr6g2379 242 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 25 236 - -
Tpr6g2379 242 SUPERFAMILY GST C-terminal domain-like 100 235 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2379 Tpr-Chr6 26099916 26101260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2379 24 241 Glutathione S-transferase Gene Family AT2G29420 47.085 4.45e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2379 K00799 - gmx:548029 328.561