Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2378 ATGACTACAAATCAGGAAGAAGTGAAGCTTTTGGGAGCTACAGGAAGCCCATTTGTGTGCAGAGTACAAATTGCTCTTAAATTGAAGGAAATTCAATACAAATTTGTTGAAGAAAACTTGGTCAACAAAAGTGAACTTCTTCTCAAATATAATCCAATTTATAAAAAAGTTCCAGTTTTTGTTCACAATGATAAACCAATAATAGAGTCACTTGTGATTCTTGAGTACATTGATGAGATTTGGAAACAAAATCAAATCTTGCCTTCAGATCCTTACCAAAGATCATTAGCTCGTTTCTGGTCCAAGTTCATTGATGATAAGATTGTGGTGGCGTCATCCAAATCGGTTTTTACAATTGATGAGAACGAGCGCGAGAAGCATATTGAAGAAGCAACTGAGGCTCTACAGATTCTTGAAAATGAGCTGAAGGGAAAGTTCTTTGGAGGGGAAGAGATTAACTTTGTGGATATTGCTGCTGTCTTTATAGCTTTTTGGATCCCTTTGATTCAAGACATTACAGACTTGAAATTGTTCACTGATGAAAAGTTTCCAAAGCTTTATAATTGGAGTCAAGAACTTCTCAACCATCCTGTTGTGAAGGAAAATCTTCCTCCTAGAGACCCTCTTTTCGCATTTTTTAAAGCTCGCTACGATGGCCTTTTTGCTGCTTCAAAATAG 678 0.3658 MTTNQEEVKLLGATGSPFVCRVQIALKLKEIQYKFVEENLVNKSELLLKYNPIYKKVPVFVHNDKPIIESLVILEYIDEIWKQNQILPSDPYQRSLARFWSKFIDDKIVVASSKSVFTIDENEREKHIEEATEALQILENELKGKFFGGEEINFVDIAAVFIAFWIPLIQDITDLKLFTDEKFPKLYNWSQELLNHPVVKENLPPRDPLFAFFKARYDGLFAASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2378 225 Gene3D - 90 224 - -
Tpr6g2378 225 CDD GST_N_Tau 8 81 - -
Tpr6g2378 225 Pfam Glutathione S-transferase, C-terminal domain 104 197 IPR004046 -
Tpr6g2378 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Tpr6g2378 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Tpr6g2378 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Tpr6g2378 225 Gene3D Glutaredoxin 1 89 - -
Tpr6g2378 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Tpr6g2378 225 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Tpr6g2378 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Tpr6g2378 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Tpr6g2378 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Tpr6g2378 225 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Tpr6g2378 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Tpr6g2378 225 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2378 Tpr-Chr6 26098272 26099497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2378 4 220 Glutathione S-transferase Gene Family AT3G09270 51.131 7.34e-75 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2378 K00799 - gmx:100806714 363.614