Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2375 ATGAACCGTGCTACCTACATTCGCCAAAGGAGGGCAGCTGGCCTTCCAGATGAAGGAGGGTCTTCATCAATGCAATTTCCTGGAAATCTGCCTCAACGCGAGAAGGCTATTGAAGAATTATACGAGGCTTTACAGTTTCTTGAGAATGAGTTGAAGGATAAGTTTTTTGGAGGAGACAAGATTGGCTTTGTGGATATTGCTGCTCTTTTCATACCTTTATTTCAAGAAGTGGCAGAGAAGCAGTTATTTACAAGTGATACATTTCACAAGCTACACAAATGGAGTCAAGATTTTTACAACCATCCAGTCGTCAAAGAAACTATGCCTTCAAAAGAACAACAATTTGCGTATTTTAAAGCTCGCGCTGCAAGCCTTGCTGCTCCATCAAAATAG 393 0.4122 MNRATYIRQRRAAGLPDEGGSSSMQFPGNLPQREKAIEELYEALQFLENELKDKFFGGDKIGFVDIAALFIPLFQEVAEKQLFTSDTFHKLHKWSQDFYNHPVVKETMPSKEQQFAYFKARAASLAAPSK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2375 130 Pfam Glutathione S-transferase, C-terminal domain 32 102 IPR004046 -
Tpr6g2375 130 CDD GST_C_Tau 33 121 IPR045074 GO:0004364|GO:0006749
Tpr6g2375 130 Gene3D - 20 128 - -
Tpr6g2375 130 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 32 124 IPR045073 -
Tpr6g2375 130 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 118 IPR010987 -
Tpr6g2375 130 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 32 124 - -
Tpr6g2375 130 Coils Coil 30 50 - -
Tpr6g2375 130 SUPERFAMILY GST C-terminal domain-like 32 123 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2375 Tpr-Chr6 26062729 26065712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2375 32 127 Glutathione S-transferase Gene Family AT3G09270 46.535 8.22e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2375 K00799 - gmx:100306196 142.51