Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2368 ATGACGCCTATGTCTCCAGGACAAGACATGTCAAATGGCACAACAAACATGATGATGAACATGCAAATGAGTTTCTATTGGGGCAGAAAAGCCACAGTGCTTTTTTCTGGATGGCCTAATAACAATCTTGGAATGTACATCTTAGCTATTTTGTTTGTGTTCTTTCTAGCTATGACAGCTGAGATTTTGTCGAACCAACCACCAATCAAACGTGGGACTAATCCGCTTGTTGGAGGGTTGATTCAGTCTTGTGTTCACTTCTTTCGAATCGGTTTCATTTACTTGCTTATGCTTGCTGTTATGTCCTTCAATGTTGGAATCTTCTTTGCTGCTGTTTTTGGTCATACTTTAGGGTTTTTTGTGACGCGGTCGCGTGCTATTTCTGTTGCTAATGGGGAAGATCAACGATCCGTGTCTGATACAATCAAAGTTTGA 435 0.4092 MTPMSPGQDMSNGTTNMMMNMQMSFYWGRKATVLFSGWPNNNLGMYILAILFVFFLAMTAEILSNQPPIKRGTNPLVGGLIQSCVHFFRIGFIYLLMLAVMSFNVGIFFAAVFGHTLGFFVTRSRAISVANGEDQRSVSDTIKV* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2368 144 Pfam Ctr copper transporter family 23 64 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g2368 144 Pfam Ctr copper transporter family 74 121 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g2368 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 4 137 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g2368 144 PANTHER CTR FAMILY COPPER TRANSPORTER 4 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2368 Tpr-Chr6 25978247 25979582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2368 24 139 Inorganic Solute Cotransporters AT5G59030 43.697 4.22e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2368 K14686 - gmx:100527849 183.341