Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2310 ATGGCTTCCACCATCAATGATTTTGCGTACGATGTGTTTCTTAGCTTCAGAGGCGAGGATACTCGCTATGGTTTCACCGGCAATCTCAAGAAAGCTCTTGTTGATAAAGGAGTCAGAACTTTCATGGATGACGTGGAGCTTCAAAAAGGGGATGAAATCACTCCATCACTTCTCAAAGCAATTGAAAATTCCAAAATTGCCATCGTTGTCCTCTCTAAAAACTATGCTGCTTCCTCTTTTTGTTTACAAGAACTTTCTAAGATCCTTGATTCAATGAAAGTTCAGGGTCGTTTTGTTTTGCCGGTTTTTTATAAGGTAGGTCCTTCTGATCTACGAAAGTTAGAAAAGACTTATGGAGAAGCAATGGCTATACATATGGCCAACTCCAATCCTAACATAGATAAATGGAAGGCGTCTCTTCACAAAGTTGCTAATTTCTCCGGCTTTCATTACAAGAAAGGGGATGTGTATGAGTATGAGTTTATTGGAACAATTGTTGAAGAGGTCTTAAGAAAGATAAAACTTGTTGCCTTACCTGTTGGTGATTACTTAGTTGGACTAGAGTCCCAAAAGGAACATGTGACTTCGCTTTTGAATGAAGTCAACATGGTAGGGATCCATGGAATTGGTGGAATAGGGAAAACAACTCTTGCTCTAGCAGTTTATAATTTGATTTGCCATCAATTTCAAGGTTCTTGTTTTCTTGAAAAAGTCAGAGAAAATTCAGACAAAAATGGATTGATATATCTCCAAAAGATCCTTCTGTCTCAAATTGTTGGAGATAAGAATATTGAGATAACAAGTGTGAGACAAGGAATTTCAATATTACAACAGAGGCTCAACCAAAAGAAGGTTCTTTTACTTCTAGATGATGTCGACAATGAGGAGCAATTACAGGCTATTGCTGGAAAATCTGATTGGTTTGGTCTTGGAAGTAGAGTCATCATCACAGCTCGGGACAAACGGTTACTAACATGTCATGGGGTTGAACGTACATATGAGGTGAAGGGTTTGAATAACAAAGATGCTTTTGAGTTGCTTAGATGGAAAGCACAATTGCATAATCCAAAATTGTATGCGAACAAATTAATTAGACAGAAGACTAACATAGTTATTTCAGGTTATGCGCATGTTTTAGAACGTGCTGTAGCATATGCTTCTGGTCTCCCGCTCGCTTTGGAAGTCATAGGTTCTCACTTTTTTAATAAGACAATAGAGCAATGTAAATATGCACTAGATCGTTATGAAAGGGTTCCCGATAAAAAGATCCAAACAACACTACAATTGAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTCTGTTTTTCTTGACATTTGTTGTTTCTTCAAAGGATATAAATTGGAAAGGGTCGAACAAATACTTCATGCTCATCATGGTGTTATCATGAAAGATCATATTAATGTGTTAGTGGAAAAATCTCTCATAAAAATAAGTGAGTCTGGTTATGTGACATTACATGATTTGATAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCGGAAGATCCTGGAAAACGCAGTAGGTTATGGGCCTCTAAAGATATAATTCAAGTTTTACAGGAAAATACGGGAACAAGTAAAATTGAAATCATACATTTGAACCGTTGGAATATTGAAGTAGAATGGGATTCCAAAGCTTTCAAGAAGATGGGAAAACTCAGAACACTCATTAGTAGCAATGTTGATTTATCCAAAAGTCCCAAATATCTTCCCAATAGTCTCAGAGTAATGGAATGGTACGATTGTCCGTCATCAAATTTACCATTTGATTTTTATCAGAAGATTGATAAATCAGTTGGTTATTTATGTAATCTTAAAATTTTGAGAATTATAAGATGCATGAAAATCAGGATTATTCCACCTCTCCTGTTAGCTTCTCTAGAAGAACTTAATATATCAGATTGTACAAGTCTCGAGACTTTTTCACCTGTAGTTGATGGATTTGTGGATAAACTTAAAACCATGAGTATTAGAAGCTGCATCAAGCTAAGGAGTATTCCACCTCTCAAGTTGGCTTCTCTAGAAGAACTCGATCTTTCAGAGTGTTATTGTCTTGAGAACTTTCCACATGTGGCAGATGGGTTGTTGGGTAAACTTAAAACAATGAGCCTTAGATGTTGCTTCAAGCTAAGGAGTATTCCACCTCTTAAGTTGAATTCGCTAGAAAAACTTGATCTTTCACGTTGTTATAGTCTCGAGAGTTTTTCACCTGTGGTGGATGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTACAAGTTGTCACAATCTCATTAGTATCCCACCTCTCAAGTTGGATTCTTTAGAAGAACTTGATCTTTCACATTGTTATAGTCTTGAGAGTTTTCCACCTGTGGTAGATGGGCTGGCGGATAAACTTAAAACCATGAGTATTAGAAATTGCATCAAAATTAGAATTATTCCACCTCTGATGTTGTCTTCTCTAGAAAAACTCGATCTTTCAAATTGTACTAGTCTCGAGAGTTTTTCACCTGTGGTAGATGGGTTGATGGATAAGCTTAAAATCATGAATGTTAGAAGTTGCATCAACCTAAGGAGTATTCCACCTCTCAAGTTGGATTCGCTAGAAAAACTTGACCTTTCAAATTGTTATAGTCTCGAGAGTTTTCCACCTGTGGTGGATGGGTTTCTTGGAAAACTTAAAACCTTGCTTGTTACAAGTTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTCTTTAGAAGAACTTGATCTTTCATGTTGTTATAGCCTCGAGAGTTTTCCAAGTGTGATGGATGGATTGTTGGATAAACTTAAATTCTTGAATATTGAACATTGTATCATGCTTAGGAGTATCCCACCGCTCAGGTTAAGTTCGTTGGAAAAGTTCAATCTTTCATATTGTCTAAGTCTCGAGAGTTTTCCAAAAATATTGGGAGAGATCAGAAATATACCAGGACTTCTCTTGTATGAAACTCCCATAAAAGCATTTCCATTTCGGAATCTTACTCCGCCTCCAACATCATATCCATGTAAATGTGGAATTGCTCAATTTCCAAATAGAGTTGTGGCGATGTCAATGCTTGCCGAATTTACCATCATGGGTGAAGGAAAAGTGATCCCAATGCAATCTTCACATGTAGAATATATTTGTCTCAGGAACTGTGAACTTTCAGATGAATATCTATCAAAAAGTCTCATGTTGTTTGCAAATGTGAAAGAATTACACCTAACCAACAATCAATTCACAGTTCTTCCTAAATCAATTGAAAAATGTCATTTTTTATGGAGACTTGTCTTGGATGATTGTGAGGAACTTCAGGAAATTAAAGGGATTCCTCCTTGCTTAAGAATGTTATCTGCACTAAACTGTCAATCGTTGACTTCGTCAAGCAAAAGAAAATTACTAAATCAGGAATTACACGAGGTTGGAAACACTTGGTTCCATTTGCCACGAGCAAAGATTCCAGAGTGGTTCGACCACCAATGCTCGGAAGGATTATCAGTTTCTTTCTGGTTTCGTAACAAGTTTCCTGACATAATTCTCTGTGTTGGTTCTCCATTGACATGGTTCCCTAATCATCTACATCGTGTAAGGGTGATCATCAATGGCAATACATTTTTCTATACACATGGTTTAAATATAGGTTGCTCACTGAAGAAAATGTATCATTTACATCTTTTTCATATGAAAATGGAAAAGTTCAATGATAATATGGATAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTGACTTCGGATTCGCATTCCAGAAAAGTGGAATCCATGTATTGAAAGACAAAAGCAACATGAAAGATATTCGATTCAATGACCCAGAAAATGATGCTAACATTGTGTTACGCCCGGGATGTTGA 3897 0.368 MASTINDFAYDVFLSFRGEDTRYGFTGNLKKALVDKGVRTFMDDVELQKGDEITPSLLKAIENSKIAIVVLSKNYAASSFCLQELSKILDSMKVQGRFVLPVFYKVGPSDLRKLEKTYGEAMAIHMANSNPNIDKWKASLHKVANFSGFHYKKGDVYEYEFIGTIVEEVLRKIKLVALPVGDYLVGLESQKEHVTSLLNEVNMVGIHGIGGIGKTTLALAVYNLICHQFQGSCFLEKVRENSDKNGLIYLQKILLSQIVGDKNIEITSVRQGISILQQRLNQKKVLLLLDDVDNEEQLQAIAGKSDWFGLGSRVIITARDKRLLTCHGVERTYEVKGLNNKDAFELLRWKAQLHNPKLYANKLIRQKTNIVISGYAHVLERAVAYASGLPLALEVIGSHFFNKTIEQCKYALDRYERVPDKKIQTTLQLSFDALQEEEKSVFLDICCFFKGYKLERVEQILHAHHGVIMKDHINVLVEKSLIKISESGYVTLHDLIEDMGKEIVRQESPEDPGKRSRLWASKDIIQVLQENTGTSKIEIIHLNRWNIEVEWDSKAFKKMGKLRTLISSNVDLSKSPKYLPNSLRVMEWYDCPSSNLPFDFYQKIDKSVGYLCNLKILRIIRCMKIRIIPPLLLASLEELNISDCTSLETFSPVVDGFVDKLKTMSIRSCIKLRSIPPLKLASLEELDLSECYCLENFPHVADGLLGKLKTMSLRCCFKLRSIPPLKLNSLEKLDLSRCYSLESFSPVVDGFLGKLKTLLVTSCHNLISIPPLKLDSLEELDLSHCYSLESFPPVVDGLADKLKTMSIRNCIKIRIIPPLMLSSLEKLDLSNCTSLESFSPVVDGLMDKLKIMNVRSCINLRSIPPLKLDSLEKLDLSNCYSLESFPPVVDGFLGKLKTLLVTSCHNLRSIPPLKLDSLEELDLSCCYSLESFPSVMDGLLDKLKFLNIEHCIMLRSIPPLRLSSLEKFNLSYCLSLESFPKILGEIRNIPGLLLYETPIKAFPFRNLTPPPTSYPCKCGIAQFPNRVVAMSMLAEFTIMGEGKVIPMQSSHVEYICLRNCELSDEYLSKSLMLFANVKELHLTNNQFTVLPKSIEKCHFLWRLVLDDCEELQEIKGIPPCLRMLSALNCQSLTSSSKRKLLNQELHEVGNTWFHLPRAKIPEWFDHQCSEGLSVSFWFRNKFPDIILCVGSPLTWFPNHLHRVRVIINGNTFFYTHGLNIGCSLKKMYHLHLFHMKMEKFNDNMDKALLENKWNHAEVDFGFAFQKSGIHVLKDKSNMKDIRFNDPENDANIVLRPGC* 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2310 1298 SUPERFAMILY L domain-like 505 886 - -
Tpr6g2310 1298 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Tpr6g2310 1298 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Tpr6g2310 1298 SMART till_3 9 146 IPR000157 GO:0007165
Tpr6g2310 1298 ProSiteProfiles TIR domain profile. 8 173 IPR000157 GO:0007165
Tpr6g2310 1298 PANTHER ARCHAEAL ATPASE 800 1261 - -
Tpr6g2310 1298 PANTHER ARCHAEAL ATPASE 20 779 - -
Tpr6g2310 1298 Gene3D - 5 174 IPR035897 -
Tpr6g2310 1298 Pfam TIR domain 9 172 IPR000157 GO:0007165
Tpr6g2310 1298 Gene3D Ribonuclease Inhibitor 1017 1151 IPR032675 -
Tpr6g2310 1298 Gene3D Ribonuclease Inhibitor 891 993 IPR032675 -
Tpr6g2310 1298 Gene3D Ribonuclease Inhibitor 522 703 IPR032675 -
Tpr6g2310 1298 SUPERFAMILY "Winged helix" DNA-binding domain 421 529 IPR036390 -
Tpr6g2310 1298 Gene3D - 175 333 IPR027417 -
Tpr6g2310 1298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 445 IPR027417 -
Tpr6g2310 1298 PRINTS Disease resistance protein signature 203 218 - -
Tpr6g2310 1298 PRINTS Disease resistance protein signature 279 293 - -
Tpr6g2310 1298 PRINTS Disease resistance protein signature 386 400 - -
Tpr6g2310 1298 PRINTS Disease resistance protein signature 819 835 - -
Tpr6g2310 1298 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 800 1261 IPR044974 GO:0006952
Tpr6g2310 1298 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 779 IPR044974 GO:0006952
Tpr6g2310 1298 Gene3D Ribonuclease Inhibitor 704 890 IPR032675 -
Tpr6g2310 1298 Gene3D - 338 435 IPR042197 -
Tpr6g2310 1298 SUPERFAMILY L domain-like 801 1151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2310 Tpr-Chr6 25212790 25223166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2310 705 886 WRKY Transcription Factor Family AT4G12020 32.258 8.55e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2310 - - mtr:MTR_6g079140 1571.6