Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2284 ATGGATTATATGAATGTTATGTTCCCTTTGAATAATCATTGGAACCAATATGGTGTGGTTTGTACTTTGTCAGGGGCAACACCAAAGGGCATATTGAAGGTAATGACGGCTATGGGGATTTCAGAGTTGAGTATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCACTACAAGAGGAAAGACTGAGAAGAAAAGCATATCAGATATACTGCCAAATTTCTGTTCTATATCTGCTCTTCAGCTAAAGGAAATCCTTCAAATGCAAGCAGAGGTGCAAAAACGCATGGATGACAGAGTTGAGGTTCAAAAAATCTTGAAGCTGAAAATTGAAGCACAAGGAAAGTACCTAGACAGAATTGGACAAAGTAATCAAAGCAGAACAATTACAAGAAAAGCTTTCAAGCCTTTTGTTGGCAAAGCTACACATCTGCCCTCTCTTTCTGAGGAATCTGAATCCTTAAAAACACAATCTGAGGAAGAACATCAAGCAGCCAAAAAGCTAAAGATCATAGATGATGATGTCTCAGAATTCTGCAACCAAACCTGGAATAACCTTTCTTGGATTCAGCTAGCTGAAGCAACATGCCAATCACCTTTGGTGCCTAGTTTCTTATTATAA 645 0.386 MDYMNVMFPLNNHWNQYGVVCTLSGATPKGILKVMTAMGISELSIYHVKSHLQKYRISKLIPESTTRGKTEKKSISDILPNFCSISALQLKEILQMQAEVQKRMDDRVEVQKILKLKIEAQGKYLDRIGQSNQSRTITRKAFKPFVGKATHLPSLSEESESLKTQSEEEHQAAKKLKIIDDDVSEFCNQTWNNLSWIQLAEATCQSPLVPSFLL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2284 214 Pfam MYB-CC type transfactor, LHEQLE motif 89 132 IPR025756 -
Tpr6g2284 214 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 26 133 - -
Tpr6g2284 214 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 26 58 IPR006447 GO:0003677
Tpr6g2284 214 Gene3D - 11 60 - -
Tpr6g2284 214 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 26 133 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2284 Tpr-Chr6 24807177 24810104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2284 38 128 G2-like Transcription Factor Family AT2G01060 53.261 7.14e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2284 - - gmx:100527384 219.55