Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2271 ATGACTGATGCAAATGTTGCCGCATTTGATGAATTTCTCCATGGATGGATTATTCGTCAAAGAAACTATCTTGATGAGCTTCTCTCAGCTCAACAACAGCAACAAGAGTTGGATGATTCTGATAGAAGGAATTTGTTAAACAGAGTACTCTGTCACTATGGACAATACTATGAAGAGAAATCAAAGATAGCCCATCAAAATATTCTCCTTCTTTTCTCACCACCATGGTTTAGTTCATTGGAAAGAGCCTTTCTTTGGGTAGCAGGGTTCAAACCAGGACTTACATTTCAACTTGTGAACAAAACTTTGGAGGATTTGTCAGAGGATCAGAGGCAGAGGTTGAGTGAACTCAAACAAGAGACAAAGATGAAGGAGAGAGAACTCAATGATGAATTGGCTAAGGTTCATGAGAGTATGGCAGGTCTACCACTTGTTGACATGATTAGAAGCCATGGAAGAGTGTGTTTGAGTAGGTCATTCATGGCAGAGGAAGGTACAGTTCCAAGTACAGTGAAGGAAACATTGGAGAATCTGGTAACAAATGCTGATACTTTGAGGACTGAGACAGCTTTGAGAGTTGTGCAGATGTTGAAACCAGCTCAGGTTCTCAACTTTTTTGTTGCTGTGGCTCAGCTTCAACTCAAGATCAGGTCTTTGGGTTTGGATAAGGATGCTCAGAGTGAAAACCAAGGTTGA 696 0.4095 MTDANVAAFDEFLHGWIIRQRNYLDELLSAQQQQQELDDSDRRNLLNRVLCHYGQYYEEKSKIAHQNILLLFSPPWFSSLERAFLWVAGFKPGLTFQLVNKTLEDLSEDQRQRLSELKQETKMKERELNDELAKVHESMAGLPLVDMIRSHGRVCLSRSFMAEEGTVPSTVKETLENLVTNADTLRTETALRVVQMLKPAQVLNFFVAVAQLQLKIRSLGLDKDAQSENQG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2271 231 Coils Coil 100 134 - -
Tpr6g2271 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Tpr6g2271 231 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 229 - -
Tpr6g2271 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Tpr6g2271 231 PANTHER - 5 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2271 Tpr-Chr6 24646491 24648389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2271 8 219 bZIP Transcription Factor Family AT5G06960 27.358 5.55e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2271 - - gmx:100780874 331.257