Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2258 ATGAATTTCTGTGATAAGCTATTTGACACGATATATATATATGATGTATTTATCAGTTTTAGAGGTTCTGACACTCGCAATGGCTTTGTCGGCCATCTCTACGGTCATCTAGTTAGAAAAGGTCTTATCGTTTTCAAAGATGACATAGAACTTCGGAGAGGAGAATATATTGCACCCCAACTTTTGCAAGCAATTAAAGATTCACGAGTTTCTATCGTTGTCTTCTCGAAAGATTATGCTTCCTCAACTTGGTGTTTGGATGAAATGACTACCATTGATGAATGCCGTGCTGAACTAAGACAGACTGTTTTCCCTATTTTCTATGATGTTGATCCATCTCATGTCCGAAAACAAAATGGAGTGTATGAGAATGCCTTTGTTGTACACACTGAGTCATTCAAACATGAGCCACACAGAGTTGATGGGTGGAAGAAAGCTATGACCTATTTGGCTGGATTAGGTGGCACAGATGTCAGGAATAAGCCAGAATTTGAAATGATTGAAACAATTGTTCAGGATGTAACAAACACATTGAATCCGAAATTGTCAGGGTGTTATGATCATCTTATTGGAGTAAGACCTTGTGTCGAAGCATTAGAAAGACTTTTAAACTTAAAGTCAGAGGACAATGCTTTTCGGGTTTTAGGAATACGGGGGATGGATGGCATAGGAAAGACAACTCTTGCAAATGTCTTGTATGATACAATCGCATATCAATTTAGTGCTTGTTGTTTTATTGAGAATCTTAGCACAATTTATAGGGATGGCGATGCTATTGCTGTCAAGAAACAAATTCTTCATCAAACTTTGAAAGAAAAAAATCTGGATGCATACAATCTCTCTGAAATATCTAAAATTTTAATAAATAGGCTATATAACATGAAGGTCCTCATAGTTCTTGACGATGTTGATCAATTTGAGCAACTAGATGAATTGCACATAGATCCCAAATTACTACATCCTGGAAGTAGAATAATCATAACCACCAGAGATGTGCATATTCTTGAATTGTATGGAGCGAATATAATTCATGAGGTTGAATTGATGAATGATTATGATGCTCGGGAACTTCTATGTAGAAAAGCCTTCAAAAATGGTAATTCAAGCAATGATTATGCAGAACTTATTTCTAATGTACTAAGATACGCTCAAGGTCTTCCATTAGCAATTAAAGTAATGGGTTCTTTCTTGCATAATAAAAACACCACCCAATGGAAAGATACCTTGAAAGGATTAGAGAAGAATCCGAATAGTGAAATTATGAAAGTTCTCCGGTCAAGTTTTGAGAAACTCGAGGGAAGAGAGAAAGAAATATTTTTGCATATTGCTTGTTTCTTTGAAGGGGAGAGGGAGGATTATGTTAAGCAAGTTCTAGATGCTTTTGGATTGCAATATGATATTGGAATTTCACTAATTGCTAAGAAATCATTCATAACCATTAGAAACCAGAAAATTTATATGCATAAAATGTTGCAAGAGTTGGGGAAACATATTATTCGGGAACAACATCCTAATGAGCCAAGATTATGGAGTAGATTGTGGCTTCATTGTGATCTCGATGATGCAATTAGAAAATCGGAAGCAATAAATGCTAAAGCCATAATTCTAAATCAAAGGGAGGATGTTAGCAAATTCAAGCAGTTGAGGGATGAAGATTTAGCAAAAATGGAGAACTTGAAAGTGCTCATATTAAATCATTCAAATTTTTCAGGAAGCTCCAAATTTCTTCCCAATTCCGTACGCTATCTTTTGTGGAATGGTTGCCCTATGACGTATTTGTCATCAAATTTTCAACCATATAACCTTGTAGAATTGAATATGCCTAATAGTAGCATGGTACAACTATGGAAAGACTTCCAGGAACTCCCCTTTTTGAAAAGGATGGATATCAGCAACTCCAAAAATCTAAAGGTCACTCCAAGGTTTGAAGGGATGCAATATCTCGAGAGGCTAGATCTTACAGGATGCATAAATTTGTCGGAGGTGCATCCATCAATTGGACTTCTGGAAAAACTTGAATTCTTGAGTTTGCAGAACTGTACTAGTCTAGTTAACCTTGATTTTGGAAATGCAGCTAGATTATGGTCTTTAAAAGTTTTGCGTCTCTCTGATTGCAAGAAACTTGAAAACACTCCGAATTTCAGTGGATTGATTTTTCTACAATATCTTGATATGGGCCGATGTGCAAGTATATCCACGATTCATGAATCTATCGGGACTCTTGAAAAACTCAGATTCATAAGTTTGAGAGACTGCACAGATCTTGTTGAAATACCTGCACAATTATTGAGATCTCTTACAACTCTAGATCTTTGTGGATGCTCTAAATTCAATAAGCTGTCATTGAGACATATTTCCACTTCTCAATCTCTGCAATCTTTGATTTTTCTAGACTTAAGTTTTTGCAATATTGTTAAAGTACCTGATGCTATTGGAGAATTTAGGTGTTTAGAAAGACTAAATCTTCAGGGAAATAACTTTACTGAACTACCCTCCACTTTCGGTAGACTTCACAATCTATCATATTTAAACCTGTCTCATTGTCATAAGCTTCAAAGTTTGTCTGATCTCCTACCAGCAAGATCTAGTTCAGTGGGAAGATATTTTAAAACAACACCTGGAACCCGTAATCATAGATCAGGATTATATATTTTTGATTCTCCCAATTACAATAAGCATGTATCCTTCTACGACTACGAATATTATTTCGGTTGGTTATTCACTCGCTGGGTAAAAAGACTAGTTATGAAACCTCTTCACTTTCGATGTGGCTTTGACATTGTTCTTCCTTTGCATGGAGATACCACTGATTGTGATGTAAATCTTGCCATTCCAAGGTATTTCCGTCACCGGTATAATGGGAGTTCAATAGCAAGGATGACTGTTCCTGTTCTGGATGTCGACTGGCTCGGCTTTCTCTTTTATGTCACATTTGATTTAAATAATCATAATCAGCAATCGTCATCTTCACAACTGCCACATCCATTTTATCTTTCTTTTGAGAGTGAATACAAAGAAGAACGATTTGATATGGCACTTAATTTGGAACTAAACAAGGTTGATGGAGAACATTACATTTGGATGATCTATATATCTCGGGAACATTGTCATTTTGTAAAAACAGGAGCACACATCACATTTAAAGCCCGCCAAGGTTTGATTATCAAGGAATGGGGGTTGCGTCTCATAACCGAGAAAGACACACAGGGCTCAATGATGGAAATGAGTGTACCAGTACATCTTCCTTTAGAGAATGTGAAAGTAAAACAAAGAAGCGACAGCAGTAGCTTTGAGCCCAAAATCCAACTTCCTTACAATTGGTTTGTTTCTGACAAAGATGAAGCCAATGGAAAAGAAACCGATCTCTTTAATCTTGGCCTTTCAACCGAAATACCACAGTGA 3402 0.3642 MNFCDKLFDTIYIYDVFISFRGSDTRNGFVGHLYGHLVRKGLIVFKDDIELRRGEYIAPQLLQAIKDSRVSIVVFSKDYASSTWCLDEMTTIDECRAELRQTVFPIFYDVDPSHVRKQNGVYENAFVVHTESFKHEPHRVDGWKKAMTYLAGLGGTDVRNKPEFEMIETIVQDVTNTLNPKLSGCYDHLIGVRPCVEALERLLNLKSEDNAFRVLGIRGMDGIGKTTLANVLYDTIAYQFSACCFIENLSTIYRDGDAIAVKKQILHQTLKEKNLDAYNLSEISKILINRLYNMKVLIVLDDVDQFEQLDELHIDPKLLHPGSRIIITTRDVHILELYGANIIHEVELMNDYDARELLCRKAFKNGNSSNDYAELISNVLRYAQGLPLAIKVMGSFLHNKNTTQWKDTLKGLEKNPNSEIMKVLRSSFEKLEGREKEIFLHIACFFEGEREDYVKQVLDAFGLQYDIGISLIAKKSFITIRNQKIYMHKMLQELGKHIIREQHPNEPRLWSRLWLHCDLDDAIRKSEAINAKAIILNQREDVSKFKQLRDEDLAKMENLKVLILNHSNFSGSSKFLPNSVRYLLWNGCPMTYLSSNFQPYNLVELNMPNSSMVQLWKDFQELPFLKRMDISNSKNLKVTPRFEGMQYLERLDLTGCINLSEVHPSIGLLEKLEFLSLQNCTSLVNLDFGNAARLWSLKVLRLSDCKKLENTPNFSGLIFLQYLDMGRCASISTIHESIGTLEKLRFISLRDCTDLVEIPAQLLRSLTTLDLCGCSKFNKLSLRHISTSQSLQSLIFLDLSFCNIVKVPDAIGEFRCLERLNLQGNNFTELPSTFGRLHNLSYLNLSHCHKLQSLSDLLPARSSSVGRYFKTTPGTRNHRSGLYIFDSPNYNKHVSFYDYEYYFGWLFTRWVKRLVMKPLHFRCGFDIVLPLHGDTTDCDVNLAIPRYFRHRYNGSSIARMTVPVLDVDWLGFLFYVTFDLNNHNQQSSSSQLPHPFYLSFESEYKEERFDMALNLELNKVDGEHYIWMIYISREHCHFVKTGAHITFKARQGLIIKEWGLRLITEKDTQGSMMEMSVPVHLPLENVKVKQRSDSSSFEPKIQLPYNWFVSDKDEANGKETDLFNLGLSTEIPQ* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2258 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 711 IPR044974 GO:0006952
Tpr6g2258 1133 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Tpr6g2258 1133 Pfam NB-ARC domain 203 427 IPR002182 GO:0043531
Tpr6g2258 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 153 IPR035897 -
Tpr6g2258 1133 Pfam TIR domain 14 183 IPR000157 GO:0007165
Tpr6g2258 1133 Gene3D Ribonuclease Inhibitor 715 782 IPR032675 -
Tpr6g2258 1133 Gene3D Ribonuclease Inhibitor 538 714 IPR032675 -
Tpr6g2258 1133 Gene3D Ribonuclease Inhibitor 783 869 IPR032675 -
Tpr6g2258 1133 Pfam Leucine rich repeat 797 849 IPR001611 GO:0005515
Tpr6g2258 1133 Gene3D - 185 342 IPR027417 -
Tpr6g2258 1133 SUPERFAMILY L domain-like 487 856 - -
Tpr6g2258 1133 Gene3D - 349 432 IPR042197 -
Tpr6g2258 1133 PRINTS Disease resistance protein signature 214 229 - -
Tpr6g2258 1133 PRINTS Disease resistance protein signature 290 304 - -
Tpr6g2258 1133 PRINTS Disease resistance protein signature 383 397 - -
Tpr6g2258 1133 PRINTS Disease resistance protein signature 789 805 - -
Tpr6g2258 1133 Pfam Leucine Rich Repeat 601 618 IPR011713 -
Tpr6g2258 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Tpr6g2258 1133 SMART till_3 13 153 IPR000157 GO:0007165
Tpr6g2258 1133 Gene3D - 12 183 IPR035897 -
Tpr6g2258 1133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2258 Tpr-Chr6 24518865 24525212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2258 692 856 WRKY Transcription Factor Family AT4G12020 31.737 7.93e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2258 - - mtr:MTR_7g069120 1257.28