Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2241 ATGGCAGCATCACCAGCATACCAAGAATATCTTCCAACATCACCAGGATGGTTAAACAAAGGAGACAACGCATGGCAAATGACAGCAGCAACACTAGTTGGACTTCAAAGCATGCCAGGATTAGTAATTCTGTATGCAAGCATAGTGAAAAAAAAATGGGCAGTGAATTCAGCTTTCATGGCACTTTATGCTTTTGCAGCAGTTTTAATCTGTTGGGTTCTTGTTGCTTATAGAATGGCATTTGGTGATCAACTTTTACCCTTTTGGGGTAAAGGAGCACCAGCTTTAGGACAAAAGTATCTTATTGGAAGAGCAAAAGTACCTGAAAGTACTCACTATTACAAGAATAGTCATGTTGTTGAATCACAAATGGAACAACCTTTTTTTCCTATGGCTTCACTTGTTTATTTTCAGTTTACTTTTGCTGCTATTACTATGATTTTGTTGGCTGGTTCTGTTCTTGGAAGGATGAATATTAAAGCTTGGATGGCTTTTGTTCCTCTTTGGCTTATTTTTTCTTATACTGTTGGTGCTTTTAGTCTTTGGGGTGGTGGATTTCTTTACCATTGGGGTGTTATTGATTATTCTGGTGGCTATGTTATTCATCTCTCTTCTGGAATTGCTGGTTTCACTGCTGCTTATTGGGTTGGACCAAGAATAAAGAGTGATAGGGAAAGGTTTCCACCAAACAATGTGTTACTGATGCTTGCAGGTTCTGGATTGCTATGGATGGGTTGGTCAGGTTTCAATGGTGGAGCACCATATGCAGCAAATGTTGCATCTTCAATTGCTGTGTTGAACACTAACATTTGTGCAGCAACTAGTCTCTTAGTGTGGACTACTCTTGATGTCATTTTCTTTGGGAAACCTTCTGTGATTGGTGCTGTTCAGGGTATGATGACTGGACTTGTTTGCATCACACCAGGAGCAGGGCTTGTGCAATCGTGGGCGGCTATTGTGATGGGAATTCTATCTGGAAGCATTCCATGGGTGACCATGATGATCTTACATAAGAAGTCAACTCTTCTACAAAAGGTTGATGACACTCTCGGTGTATTTCACACTCATGCTGTGGCTGGCCTATTAGGTGGCCTACTCACTGGACTTTTCGCCGAGCCAGCCCTATGTAGACTACTATTGCCAGTGACCAATTCAAGGGGTGCATTCTATGGTGGAAGTGGTGGTGTGCAATTCCTAAAACAATTAGTAGCAGCATTGTTTGTTATTGGATGGAACATAGTCTCCACCACAATCATTCTCCTTGTTATACAAATTTTCATACCCTTGAGAATGCCCAACGAGCAGCTTGAAATCGGAGACGATGCGGCTCATGGTGAGGAAGCTTACGCTCTTTGGGGTGATGGAGAAAAATATGATCCAACTAGACATGGTTCATTAAATACTGGTACCACTGGAGTATCACCTTATGTTAATGGTGCAAGAGGTGTTACTATTAATTTATGA 1464 0.4133 MAASPAYQEYLPTSPGWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVAYRMAFGDQLLPFWGKGAPALGQKYLIGRAKVPESTHYYKNSHVVESQMEQPFFPMASLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLMLAGSGLLWMGWSGFNGGAPYAANVASSIAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLLLPVTNSRGAFYGGSGGVQFLKQLVAALFVIGWNIVSTTIILLVIQIFIPLRMPNEQLEIGDDAAHGEEAYALWGDGEKYDPTRHGSLNTGTTGVSPYVNGARGVTINL* 488
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2241 487 PANTHER AMMONIUM TRANSPORTER MEP2 1 484 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr6g2241 487 TIGRFAM amt: ammonium transporter 22 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr6g2241 487 PRINTS Rhesus blood group protein signature 138 154 IPR002229 GO:0005887
Tpr6g2241 487 PRINTS Rhesus blood group protein signature 233 251 IPR002229 GO:0005887
Tpr6g2241 487 PRINTS Rhesus blood group protein signature 264 286 IPR002229 GO:0005887
Tpr6g2241 487 PRINTS Rhesus blood group protein signature 319 337 IPR002229 GO:0005887
Tpr6g2241 487 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tpr6g2241 487 Pfam Ammonium Transporter Family 24 449 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tpr6g2241 487 Gene3D Ammonium transporter AmtB like domains 3 452 IPR029020 -
Tpr6g2241 487 SUPERFAMILY Ammonium transporter 17 431 - -
Tpr6g2241 487 PANTHER AMMONIUM TRANSPORTER 1 484 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr6g2241 Tpr-Chr6 24390084 24395696 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2241 131 487 Inorganic Solute Cotransporters AT2G38290 78.273 0.0 554
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2241 K03320 - gmx:100790119 881.322