LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g2241	ATGGCAGCATCACCAGCATACCAAGAATATCTTCCAACATCACCAGGATGGTTAAACAAAGGAGACAACGCATGGCAAATGACAGCAGCAACACTAGTTGGACTTCAAAGCATGCCAGGATTAGTAATTCTGTATGCAAGCATAGTGAAAAAAAAATGGGCAGTGAATTCAGCTTTCATGGCACTTTATGCTTTTGCAGCAGTTTTAATCTGTTGGGTTCTTGTTGCTTATAGAATGGCATTTGGTGATCAACTTTTACCCTTTTGGGGTAAAGGAGCACCAGCTTTAGGACAAAAGTATCTTATTGGAAGAGCAAAAGTACCTGAAAGTACTCACTATTACAAGAATAGTCATGTTGTTGAATCACAAATGGAACAACCTTTTTTTCCTATGGCTTCACTTGTTTATTTTCAGTTTACTTTTGCTGCTATTACTATGATTTTGTTGGCTGGTTCTGTTCTTGGAAGGATGAATATTAAAGCTTGGATGGCTTTTGTTCCTCTTTGGCTTATTTTTTCTTATACTGTTGGTGCTTTTAGTCTTTGGGGTGGTGGATTTCTTTACCATTGGGGTGTTATTGATTATTCTGGTGGCTATGTTATTCATCTCTCTTCTGGAATTGCTGGTTTCACTGCTGCTTATTGGGTTGGACCAAGAATAAAGAGTGATAGGGAAAGGTTTCCACCAAACAATGTGTTACTGATGCTTGCAGGTTCTGGATTGCTATGGATGGGTTGGTCAGGTTTCAATGGTGGAGCACCATATGCAGCAAATGTTGCATCTTCAATTGCTGTGTTGAACACTAACATTTGTGCAGCAACTAGTCTCTTAGTGTGGACTACTCTTGATGTCATTTTCTTTGGGAAACCTTCTGTGATTGGTGCTGTTCAGGGTATGATGACTGGACTTGTTTGCATCACACCAGGAGCAGGGCTTGTGCAATCGTGGGCGGCTATTGTGATGGGAATTCTATCTGGAAGCATTCCATGGGTGACCATGATGATCTTACATAAGAAGTCAACTCTTCTACAAAAGGTTGATGACACTCTCGGTGTATTTCACACTCATGCTGTGGCTGGCCTATTAGGTGGCCTACTCACTGGACTTTTCGCCGAGCCAGCCCTATGTAGACTACTATTGCCAGTGACCAATTCAAGGGGTGCATTCTATGGTGGAAGTGGTGGTGTGCAATTCCTAAAACAATTAGTAGCAGCATTGTTTGTTATTGGATGGAACATAGTCTCCACCACAATCATTCTCCTTGTTATACAAATTTTCATACCCTTGAGAATGCCCAACGAGCAGCTTGAAATCGGAGACGATGCGGCTCATGGTGAGGAAGCTTACGCTCTTTGGGGTGATGGAGAAAAATATGATCCAACTAGACATGGTTCATTAAATACTGGTACCACTGGAGTATCACCTTATGTTAATGGTGCAAGAGGTGTTACTATTAATTTATGA	1464	0.4133	MAASPAYQEYLPTSPGWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVAYRMAFGDQLLPFWGKGAPALGQKYLIGRAKVPESTHYYKNSHVVESQMEQPFFPMASLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLMLAGSGLLWMGWSGFNGGAPYAANVASSIAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLLLPVTNSRGAFYGGSGGVQFLKQLVAALFVIGWNIVSTTIILLVIQIFIPLRMPNEQLEIGDDAAHGEEAYALWGDGEKYDPTRHGSLNTGTTGVSPYVNGARGVTINL*	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g2241	487	PANTHER	AMMONIUM TRANSPORTER MEP2	1	484	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Tpr6g2241	487	TIGRFAM	amt: ammonium transporter	22	449	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Tpr6g2241	487	PRINTS	Rhesus blood group protein signature	138	154	IPR002229	GO:0005887
	Tpr6g2241	487	PRINTS	Rhesus blood group protein signature	233	251	IPR002229	GO:0005887
	Tpr6g2241	487	PRINTS	Rhesus blood group protein signature	264	286	IPR002229	GO:0005887
	Tpr6g2241	487	PRINTS	Rhesus blood group protein signature	319	337	IPR002229	GO:0005887
	Tpr6g2241	487	ProSitePatterns	Ammonium transporters signature.	194	219	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Tpr6g2241	487	Pfam	Ammonium Transporter Family	24	449	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Tpr6g2241	487	Gene3D	Ammonium transporter AmtB like domains	3	452	IPR029020	-
	Tpr6g2241	487	SUPERFAMILY	Ammonium transporter	17	431	-	-
	Tpr6g2241	487	PANTHER	AMMONIUM TRANSPORTER	1	484	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g2241	Tpr-Chr6	24390084	24395696	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g2241	131	487	Inorganic Solute Cotransporters	AT2G38290	78.273	0.0	554

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g2241	K03320		-	gmx:100790119	881.322