Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2237 ATGAATCAGCAAGAAATTCTTCACTCTCCATGGCCATTAACTTATGTACAAATAGACTCATCAATCTTTGATAATCATCATCAAACCATGGTACATCTTGGTCACTATGATCCATATGGCATCATCATGGATGACCATGTTGATGATTATGGTTCATATGGCATGATCATGGATGATGACCATGTTGATGTTGACTATGTTCCATATGGCATCATCATGAATGACCATGTTGATGATTATGAATTCAATACTCTACTAAGCACTTCAGAGAATAGTAATCTCTCGGAAATTTCCATGTTCACCAATGATCATGTCCAATTTCCAATTGATGAATCAGAAATCTTGGAACTTTCATCACTCATGGAATTAGAATCTTTTGATTCAATTTCATGTCCTCAAATTGTTGATATTCATGAATATGAATACCGAGAAGAAAGCGAAGGGAGCTTCCCTTCACAAAATTTTCCCTGTAACCTCGAGGAACAAAGTTCAAATCTCATCAGAGACAGTTGCGAAATGAACATTGGTACTACTACTACTATAACTAATGATAATTTCGCGTCACAAAATTTCCAATATGATTCATGGAGTCCAACACAATCAATGAAATCAGATTTTTCCTCAATTCAACAATCACTTATTCTTCCCCAACAAAACATGGAAATTGAAAATCAAGTGAGTCTTCCACACTTGATGGAAGCACATGGAGAAGCTTTAGAGAAAGGACAAAAAGCACTAGCAGAAGTTAATTTGAAGTGTATAAGCCAAAAAGTTACTCCAATGGGTGATTCTTTTGAAACACTTGCATTTTATTTGTCTCAAGAGGTTACAAATCATGGTGAATATCTCAAAGGCGAGGCTCAAAAGAACTTCGATTCTTCTTTCAAAGCACTCTATCAAGGGAATTTAGTTGGAAAAGTTGCTCATTTTGCAGCTATTTCAGCAATTCTTGAGGCTGCTATGTTAGAAGATTGTGATGAAATCCACATAATTGATTTTTGTATTGGAAATGGTGTTCAATGGCCTTCTTTATTGGAGTCTGCTTCAAGAATAAACAAAAGATTGAAATTGACATCAATTAAATCGAGTCACGATGAAAATTCTGAATGTGTTTGGAATTTTGAGGATACTAAAAGGGAACTTTGTGAGTATGCGAAATCATGTGGTTTGAACTTGATGGTAGAGGAAAAGGGATTAGAGGAATTGGTTAGTGAGATCAAAATAATGAACAAACGCGGTGCGAGGAAAGTGTTTTTAGCCTTTAATTTGATGATTGGTCTTCCTCACATGGGAATGGTAAGAAACAGAAGAAAAAATGCTTTGGAATTTTTGAAAGTAGCTGAGGATTTGATCAAGAATTGTGGAAGCAAGGGAATGATTACATTTGGCGATGGCGATGTATTTGAGAAACTGAAAAACAGTTTAAATTTTAAGTCATTTTTTGAAGGGAATTTGGTGCATTATAAGGCTTTGTTGGAATCAATTGAATCACAATTTTCAGAAAAATTCTCAAAAGCAAGAATTGCATGTGAAGTGCTTTTTGTTGCACCTTGTATATCTTCTTGTGATTGGTTACAAACATGGGAAGAGATGAAAAGTGATGGTGATTTTCAAGCTGAGATTAGCTTAGAAAGTGGATGTTTGAGCAAAAATGTTTTGATGGAAGTAAAAGAAGTGTTGAGAGGGTGTGAAAGTTCTTATCAAGCTAGAATTGAAGGAGGAAATGAGAATGAACTTGTTGTGGAATGGAAAGGAACTCAATTATTAAGATTTTCCATTTGGAAAAACTAA 1791 0.3484 MNQQEILHSPWPLTYVQIDSSIFDNHHQTMVHLGHYDPYGIIMDDHVDDYGSYGMIMDDDHVDVDYVPYGIIMNDHVDDYEFNTLLSTSENSNLSEISMFTNDHVQFPIDESEILELSSLMELESFDSISCPQIVDIHEYEYREESEGSFPSQNFPCNLEEQSSNLIRDSCEMNIGTTTTITNDNFASQNFQYDSWSPTQSMKSDFSSIQQSLILPQQNMEIENQVSLPHLMEAHGEALEKGQKALAEVNLKCISQKVTPMGDSFETLAFYLSQEVTNHGEYLKGEAQKNFDSSFKALYQGNLVGKVAHFAAISAILEAAMLEDCDEIHIIDFCIGNGVQWPSLLESASRINKRLKLTSIKSSHDENSECVWNFEDTKRELCEYAKSCGLNLMVEEKGLEELVSEIKIMNKRGARKVFLAFNLMIGLPHMGMVRNRRKNALEFLKVAEDLIKNCGSKGMITFGDGDVFEKLKNSLNFKSFFEGNLVHYKALLESIESQFSEKFSKARIACEVLFVAPCISSCDWLQTWEEMKSDGDFQAEISLESGCLSKNVLMEVKEVLRGCESSYQARIEGGNENELVVEWKGTQLLRFSIWKN* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2237 596 Pfam GRAS domain family 234 595 IPR005202 -
Tpr6g2237 596 ProSiteProfiles GRAS family profile. 219 595 IPR005202 -
Tpr6g2237 596 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 50 595 - -
Tpr6g2237 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 595 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2237 Tpr-Chr6 24347062 24349073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2237 247 511 GRAS Transcription Factor Family AT5G66770 26.165 2.37e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr6g2237 GRAS 8.5e-28 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2237 - - mtr:MTR_7g069740 857.825