Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2221 ATGCTTGTTACTATTTTCTTCATCTTTCTGTTCTGTTTCCATCCCGTCGTTTCTCTCACCTCCGACGGCCTCGCTCTTCTAACACTCAAATCCGCCGTCGACGGAGACGCCGAAGCCGCATTCACCGATTGGAACGAAGACGACAATACGCCGTGTCATTGGTCCGGCATTAGCTGTGCTAACATCTCCGGCGAATCAGACTCTCGTGTCGTAGGTATTGCTCTCGCCGGAAAAGGCCTCCGTGGTTATCTCCCGTCGGAGCTCGGAAAGTTAATCTATCTCCGTCGTCTCAGTCTTCATACTAATCTCTTCCACGGTTCCATTCCCGTTCAGCTCTTCAATGCTACCTCTCTCCACAGTATTTTCCTCCACGGTAACAACCTCTCCGGTAACATTTCTCCGTCAATTTGCAACCTTCCACGTCTACAAAACGTTGACCTCTCTGAAAATTCACTCGCCGGAGTTATCCCGGAGTCTCTCGGAAACTGTTCCCAGCTTCAACGACTCATTCTCGCGAGAAATAATTTTTCCGGTGATATTCCGGTGACTCCATGGCCGAAGCTGAAAAACCTCGTTCAGCTCGACCTTTCCGATAATCTTCTGGAAGGTTCGATTCCAGACCAAATCGGCGATCTCAATTCCCTCACCGGAACCCTAAATCTATCATTCAATCACCTATCAGGTAAAGTCCCGAAATCTCTAGGAAAATTGCCGGTAACGGTTAGCTTTGATCTTCGAAACAACGATCTAAGCGGTGAAATTCCTCAAACCGGGTCGTTTTCCAATCAGGGACCCACGGCGTTTCTCAATAACCCGAAACTATGTGGGTTTCCTCTTCAAAAACAGTGCACCGGTTCAGCACCAAGTGAACCGGGGACTAGCCCCGGTTTAGCTCGACCGCATGTAAACCGGTCTAAGAAAGGGTTGAGTCCCGGTTTAATTATTATTATAACTGTGGCTGATGCTGCTGTTGTGGCTTTGATTGGGCTTGTTGTTGTGTATGTGTATTGGAAGAAGAAAGATAAGTCTAATGGGTGTAGTTGTACTTTGAAGAGGAAATTTGGTGGTAGTGGAAACAATGAGAGATCAAATTTGTGTTGTTTTTGTTGGTCATTAGGGTGTGTGAAAGGGTTTAAGAGTGATGATTCTGAGATGGAAGAGAGTGAGAAAGGAGGAGGTGGTGGTGGAGGCGGTGGTGGTGGTGGTGGGAGAGGGGAAAGTGAAGGTGAAGGTGAATTGGTGGCAATTGATAAAGGTTTTAGCTTTGAACTTGATGAGTTGTTAAGAGCTTCTGCATATGTGTTAGGGAAAAGTGGGTTAGGGATTGTGTATAAGGTTGTGCTTGGGAATGGTGTACCTGTTGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAAAGGTATAAGGAATTTGCTGCTGAAGTTCAAGCAATTGGGAAAGTGAAACATCCTAATATTGTTAAGTTAAGAGCTTATTATTGGGCTCATGATGAAAAGCTTTTGATTAGTGATTTCATCTCCAATGGCAATTTGGCTAATGCTCTTAGAGGAAGAAATGGCCAACCATCTCCTAATCTTTCATGGTCAACCAGGCTGAAAATAGCCAAAGGAACAGCCAGGGGTTTAGCTTATCTCCATGAATGCAGTCCGAGAAAATTTGTTCACGGCGACCTCAAACCTTCCAATATCCTCCTTGACACAGACTTCCAACCTCTCATTTCTGATTTTGGTCTTAACCGGCTGATCAGTATCACCGGAAATAATCCCTCCACCGGTGGTTTTATGGGTGGAGCTCTTCCTTACTTGAAATCATCACAAACCGAACGAATCAACAACTATAAAGCACCTGAAGCTAAAGTACCAGGCTGCAGACCTACCCAAAAATGGGATGTGTATTCATTTGGTGTTGTATTACTTGAATTGCTCACTGGTAAGTCCCCGGATTCTTCTCCAGGAGCATCAACTTCTATGGAAGTGCCTGATTTGGTAAGGTGGGTAAAGAAAGGGTTTGAACAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTTCAAGAAATCCATGCTAAGAAAGAAGTACTAGCTGTGTTCCATGTAGCACTATCATGCACTGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCCGACAATCTTGAAAGAATTTGA 2175 0.452 MLVTIFFIFLFCFHPVVSLTSDGLALLTLKSAVDGDAEAAFTDWNEDDNTPCHWSGISCANISGESDSRVVGIALAGKGLRGYLPSELGKLIYLRRLSLHTNLFHGSIPVQLFNATSLHSIFLHGNNLSGNISPSICNLPRLQNVDLSENSLAGVIPESLGNCSQLQRLILARNNFSGDIPVTPWPKLKNLVQLDLSDNLLEGSIPDQIGDLNSLTGTLNLSFNHLSGKVPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNPKLCGFPLQKQCTGSAPSEPGTSPGLARPHVNRSKKGLSPGLIIIITVADAAVVALIGLVVVYVYWKKKDKSNGCSCTLKRKFGGSGNNERSNLCCFCWSLGCVKGFKSDDSEMEESEKGGGGGGGGGGGGGRGESEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDLKPSNILLDTDFQPLISDFGLNRLISITGNNPSTGGFMGGALPYLKSSQTERINNYKAPEAKVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSMEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSDNLERI* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2221 724 CDD STKc_IRAK 435 724 - -
Tpr6g2221 724 SMART serkin_6 433 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2221 724 Gene3D Phosphorylase Kinase; domain 1 412 504 - -
Tpr6g2221 724 MobiDBLite consensus disorder prediction 385 404 - -
Tpr6g2221 724 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 724 - -
Tpr6g2221 724 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Tpr6g2221 724 SUPERFAMILY Protein kinase-like (PK-like) 434 721 IPR011009 -
Tpr6g2221 724 Pfam Protein kinase domain 434 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2221 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Tpr6g2221 724 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Tpr6g2221 724 SUPERFAMILY L domain-like 21 280 - -
Tpr6g2221 724 ProSiteProfiles Protein kinase domain profile. 429 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2221 724 Gene3D Transferase(Phosphotransferase) domain 1 505 724 - -
Tpr6g2221 724 Gene3D Ribonuclease Inhibitor 21 183 IPR032675 -
Tpr6g2221 724 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2221 Tpr-Chr6 24107946 24113311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2221 15 724 Receptor kinase-like Gene Family AT1G67510 69.421 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr6g2221 Pkinase 2.8e-31 CL0016
TF S1Fa-like Tpr6g2221 Pkinase 2.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2221 - - gmx:100795021 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2221 6 24107946 24113311 Tpr4g0669 4 6172405 6176605 PCT