Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2184 ATGGAAGAGGAACACAATGATCACACATTGCTTGTATCACAAGCAATCAAGTGCCTTCCAAGATATTTAGTGGGGATGACTTCTCCTTTAGAAGAATTGGAAGAACATGTATTTTTGGATTTGGCTAATGATGTTGGGGTTTTAGGAATTTGCGGGATGAGAGGAATAGGGAAATCAACTCTTGCTGCTGTTTTATATGACAGAATCTTTCATGAATTTGAAGCATGTTGTGTTATCGATGATGTGGGCAAAATTTATAGAGTCAATGGCCCAATTGGTGCACAAAAGCAAATTCTACATCAAACACTAAAGGAAGAACACCTTCGGGTAAGCAATCCTTATGAAGCAACTATTTTGATACGAAGCAGGATGCTTCATTTAAAGGCCCTTGTAATTCTTGATAATGTTGATCGGATTGAACAACTGGAGAAATTAGCCGTAAATCGTGAATGTTTTGCTGCAGGGAGTAGAATCATTATAATTTCTAGATATGAGCACATCTTAAAAGAGTATGGACTGGATGCAGTTTACAAAGTTCCACTCTTGAATCAAACTAATTCTCTTCAATTATTATTCTATCAAAAAGTTTTCAAATGTGCTGATATTACTAGTTATTATGAACAATTGGCGTGTGACATGCTACATTATGCAAATGGCAGGCCTCTAGCTATTAAAAAAATATTGGGTTCATTTTTGTTTACCCTACATATCTCTCAATGGATAAATGTATTGATTAGATTGAGAGAAAGTCCAAACAATGATATTATAGATGTGCTACAGTCAATGTACCGATACCCACTACAACATCCTATGTATCAGTATCAGTACAATGAATGGCGACCCTGTCGCGGTCAAACCAACCAGTTGTGCCGTGAAGGATCAGCCTGGTGGTGA 894 0.3702 MEEEHNDHTLLVSQAIKCLPRYLVGMTSPLEELEEHVFLDLANDVGVLGICGMRGIGKSTLAAVLYDRIFHEFEACCVIDDVGKIYRVNGPIGAQKQILHQTLKEEHLRVSNPYEATILIRSRMLHLKALVILDNVDRIEQLEKLAVNRECFAAGSRIIIISRYEHILKEYGLDAVYKVPLLNQTNSLQLLFYQKVFKCADITSYYEQLACDMLHYANGRPLAIKKILGSFLFTLHISQWINVLIRLRESPNNDIIDVLQSMYRYPLQHPMYQYQYNEWRPCRGQTNQLCREGSAWW* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2184 297 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 261 IPR044974 GO:0006952
Tpr6g2184 297 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 23 261 - -
Tpr6g2184 297 Gene3D - 181 265 IPR042197 -
Tpr6g2184 297 Pfam NB-ARC domain 39 250 IPR002182 GO:0043531
Tpr6g2184 297 Gene3D - 3 175 IPR027417 -
Tpr6g2184 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 264 IPR027417 -
Tpr6g2184 297 PRINTS Disease resistance protein signature 47 62 - -
Tpr6g2184 297 PRINTS Disease resistance protein signature 123 137 - -
Tpr6g2184 297 PRINTS Disease resistance protein signature 217 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2184 Tpr-Chr6 23772042 23774330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2184 24 263 WRKY Transcription Factor Family AT5G45050 28.279 8.30e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2184 - - cam:101512606 344.739