LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g2161	ATGTATGGAACTTATTTGATGAAGTATGATTTGAAGTTGGATGTTGAAGTTGGGCTCAAAATCGCGCAAGAGAGGAGTTACCAACTTTGGGTCAAGCTCAAAGTAATTGGGAAGCTGATAAAATCAATTGATGCACCTGGAGGATTTCTTTTCGAGTGGTGGTCTGTCTTTTGGGATATATTCATCTCGAGAACAAATGAGAAACATTCTGAGGCTGCTGCCGCTTACATTGAGACCCAGCAAACGAAGGCAAAAGAACAACTTCAAATGCAACTAATGCAGCAACGCAATGTCCAGTTACAGAGAAGAGATCCTAATCATCCTGCACTGAGTGGACTGGGTGGTTCCTTAAATGCCATTAACTCTGAAGGTATGTTGGGGCAGCCACCAGCAAGTGTGTTGGCTATGAAAATGTATGAAGAGCGAATGAAACACCCTCATTCAATGGATTCAGAAGCATCTCCAAATCTTATCGATGCGAATAGGATGGCTCTTCTCAAATCAGCAACAAGTCATCAAGGTCAGCTGGTTCATGGTAATTCAGGGAATATGTCCAATGCATTGCAGCAACTGCAAGCACGGTCTACTTTAACCAATGACATCAAAGGAGATGTTAACATTGGCGCTGGTCCAAAGAATTTGCCTTTGGATACATCAGTTTATCGACAAGCAATTTTACAATCAAAATCTGGGTTAGGAAGTGCAGGATTAAATCAAGGAGTTACAAGTCTTCCGTTGAAGGGATGGCCTCTAACTGGAATTGATCAATTAAGACCTGGTTTGGGTGTACAAGTTCAGAAGCCTAATTTAACACCACAAAACCAATATATGTTAGCATCACAACAACAACAGGTCTTGGCGCAGGCTCAGGCACAAAACAGCCTTGGAAATTCTAATTATGGTGATATGGATCCGCGTAGACTTTCTGGTCTTCCCCGAGGTAGCTTAAATGTGAAGGATGGTCAATCTAACAGGAACTATGGAACCATTTCCTCCCAAATGCAATCAGGTTCACCTAAGATGAGGATGAACCAGTCACAACAATCGTTATCTCAGCAGCAAGAGCAATTGCAGCAGAATCAACTTCAGCAGGCAAGAGGCAGGCTGAGGAAGAAGTACAGGCAGTGA	1128	0.4273	MYGTYLMKYDLKLDVEVGLKIAQERSYQLWVKLKVIGKLIKSIDAPGGFLFEWWSVFWDIFISRTNEKHSEAAAAYIETQQTKAKEQLQMQLMQQRNVQLQRRDPNHPALSGLGGSLNAINSEGMLGQPPASVLAMKMYEERMKHPHSMDSEASPNLIDANRMALLKSATSHQGQLVHGNSGNMSNALQQLQARSTLTNDIKGDVNIGAGPKNLPLDTSVYRQAILQSKSGLGSAGLNQGVTSLPLKGWPLTGIDQLRPGLGVQVQKPNLTPQNQYMLASQQQQVLAQAQAQNSLGNSNYGDMDPRRLSGLPRGSLNVKDGQSNRNYGTISSQMQSGSPKMRMNQSQQSLSQQQEQLQQNQLQQARGRLRKKYRQ*	376

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g2161	375	PANTHER	TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8	42	362	IPR044716	GO:0003714
	Tpr6g2161	375	Coils	Coil	83	103	-	-
	Tpr6g2161	375	Coils	Coil	340	375	-	-
	Tpr6g2161	375	MobiDBLite	consensus disorder prediction	316	366	-	-
	Tpr6g2161	375	MobiDBLite	consensus disorder prediction	312	375	-	-
	Tpr6g2161	375	PANTHER	TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED	42	362	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g2161	Tpr-Chr6	23384568	23389774	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	LUG	Tpr6g2161		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g2161	-		-	gmx:100786946	496.123