Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2153 ATGGCAGAAAACACGCAAATTCAAACACAAAACGAGTCAAAACGCGTCGTTTTGTTCGGTAAATACGAAATTGGAAGATTATTGGGCGTTGGTGCATCCGCGAAGGTGTATCACGCGACAAACGTTGAAAACGGGAAGAGCGTGGCGGTGAAAGTCATAAGCAAGAAAAAACTCATCAATGGAGAATTCGCCGCCAACATTGAACGCGAGATCTCAATTCTCCGCCGTCTCCACCACCCTAACATCATTGACCTGTTTGAAGTTCTCGCATCGAAGTCCAAAATTTACTTCATCGTTGAATTCGCCGCCGCCGGCGAACTCTTCGAAGAAGTAGCAGGCAAAGAAAAGCTTACTGAAGGCCACGCTAGAAGATACTTCCGGCAACTCATCTCCGCCGTGAAACACTGTCACTCTCGCGGCGTTTTCCACCGCGATCTTAAACTCGATAATCTTTTACTCGACGAGAATGATAATCTCAAAGTAACGGATTTCGGTTTAAGCGCCGTTAAAAACCAGATCCGACCCGACGGTTTACTTCACACCGTTTGTGGTACACCGTCCTACGTGGCACCGGAGATACTCGCGAAGAAAGGCTACGATGGTGCGAAAGCTGATGTATGGTCATGCGGCGTCGTTTTGTTTGCTCTTACTACAGGGTATTTACCGTTTAATGATTATAATATTACCGTGCTTTATAGAAAAATTTACCGCGGTCAATTTCGTTTACCGAAAGAGATATCTTGTGATCTGAAGAATCTCTTATCACGTTTGTTGGAAACGAATCCTAAGACAAGGATAACCGTTGATGAGATTCTTGAAGACCCGTGGTTCAACTTGGGTGGATTTAAGTTGGACCGGGTTTTAGTTAAGTCTGAGCTGGAGGGGGAGAATCGAATCGGATTTAAACCAATGAACGCATTTGACTTGATATCTTTTTCAACTGGGTTGGATATGTCGGGTATGTTTGAGGAAAATGACGGGTCAGTTTTAATTGAACGGGTTGTTTCGGCGGAGGTGCCGGCAAGGATTTTGGAGAGGGTGGTGGAAATGGTGAAGGGGACAAAAGTAGTGGTGAAAAGAATGGAGAATTGTGGTGGAGCAAAGTTGGAAGGGCAAGAAGGTAATTTGATTGCTCTTGTTGTGGTTTACCGGTTAACGGATGAGTTAGTTGTAGTTGAAATGAAGAAGCGTGGAAAAGGGGAGGAATATGGCGCGCAATTGTGGAAAAATAAATTGAAACCTTTTCTTGTTGAGTTGGCTAAGAAACAGGAAGTGCCGGTTTCTCGGTGA 1290 0.4473 MAENTQIQTQNESKRVVLFGKYEIGRLLGVGASAKVYHATNVENGKSVAVKVISKKKLINGEFAANIEREISILRRLHHPNIIDLFEVLASKSKIYFIVEFAAAGELFEEVAGKEKLTEGHARRYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENDNLKVTDFGLSAVKNQIRPDGLLHTVCGTPSYVAPEILAKKGYDGAKADVWSCGVVLFALTTGYLPFNDYNITVLYRKIYRGQFRLPKEISCDLKNLLSRLLETNPKTRITVDEILEDPWFNLGGFKLDRVLVKSELEGENRIGFKPMNAFDLISFSTGLDMSGMFEENDGSVLIERVVSAEVPARILERVVEMVKGTKVVVKRMENCGGAKLEGQEGNLIALVVVYRLTDELVVVEMKKRGKGEEYGAQLWKNKLKPFLVELAKKQEVPVSR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2153 429 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Tpr6g2153 429 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2153 429 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tpr6g2153 429 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 7 427 - -
Tpr6g2153 429 CDD CIPK_C 305 416 - -
Tpr6g2153 429 Pfam NAF domain 303 359 IPR004041 GO:0007165
Tpr6g2153 429 PANTHER - 7 427 - -
Tpr6g2153 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Tpr6g2153 429 Gene3D Transferase(Phosphotransferase) domain 1 13 298 - -
Tpr6g2153 429 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2153 429 Gene3D Kinase associated domain 1, KA1 299 421 - -
Tpr6g2153 429 SUPERFAMILY Protein kinase-like (PK-like) 18 278 IPR011009 -
Tpr6g2153 429 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2153 Tpr-Chr6 23291026 23292889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2153 1 424 CBL-interacting serine-threonine protein kinases AT5G01820 53.132 1.70e-153 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr6g2153 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2153 - K12761 gmx:100788245 577.4