Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2152 ATGGGAAATTACAGGTTCAAATTGTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACAAACACAAACAACACAACAACAAAGGAAGAAAAAGAAATCAACAACCACAAACACATCAAAATCAAAGCAACCCCACCAAACCAATCCAAGAAAATCTTACTACTTTACAAGAGAACTTAACCAAACAAGCAATAACAACATAATCTACAACACTTCACCTGAACAACCTAGAAAATCATCATCAAAACAACAAAGACCAAAAATAAGAACACCAAAAACATCATCATCAACATCATCTCCACTTGATAGCTTTTCAGAATCAGAATCCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCTTCCCACAAATGACATCATAATAGATGTTGACAACAATTCTTTAATTTCAACAAGAAAAGATGATAAGCTAAATGGGTATGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTGACAAAACCAGAGAATTTCAATTACTTGCTAAACTATACAAAGAAGAAACAAACAAAACCCAGAAGCAAAATTTCATCAAATGATGAACATAACGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGATGAAGAACAGAGGAACATCAACACAAACACACCAAGTAGAAGATTCTCTATGAGTTCACCAAGTGTGAAGCTTAGAATCAATTCTAGCAAGAAAATTCAATCACATGGCCGGAAAAGCGTGTCGTCCACCACTACTAGTTCGGCCGGTAACCGGAGAAGTCTTTCGGATAGTTTGGCAATTGTGAAGTCATCAATGAATCCACAGAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAGAACAATATTAGAACATCAAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATGAACTTATCATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1017 0.354 MGNYRFKLSDMMPNAWFYKLRDMGRTRNQTQTQTTQQQRKKKKSTTTNTSKSKQPHQTNPRKSYYFTRELNQTSNNNIIYNTSPEQPRKSSSKQQRPKIRTPKTSSSTSSPLDSFSESESPDPEIRTDRVLLPTNDIIIDVDNNSLISTRKDDKLNGYDSLSELMKLPPIVTKPENFNYLLNYTKKKQTKPRSKISSNDEHNVKGSLKVKILKDEEQRNINTNTPSRRFSMSSPSVKLRINSSKKIQSHGRKSVSSTTTSSAGNRRSLSDSLAIVKSSMNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDLTDNQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2152 338 Pfam Transcriptional repressor, ovate 278 334 IPR006458 -
Tpr6g2152 338 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 273 335 IPR006458 -
Tpr6g2152 338 MobiDBLite consensus disorder prediction 97 117 - -
Tpr6g2152 338 MobiDBLite consensus disorder prediction 217 270 - -
Tpr6g2152 338 MobiDBLite consensus disorder prediction 80 129 - -
Tpr6g2152 338 ProSiteProfiles OVATE domain profile. 274 333 IPR006458 -
Tpr6g2152 338 MobiDBLite consensus disorder prediction 27 63 - -
Tpr6g2152 338 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 338 IPR038933 GO:0045892
Tpr6g2152 338 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Tpr6g2152 338 MobiDBLite consensus disorder prediction 222 270 - -
Tpr6g2152 338 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2152 Tpr-Chr6 23255228 23256790 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr6g2152 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2152 - - mtr:MTR_7g072875 405.986