Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2150 ATGTACAAGGGGAGATTTTGCACTTCAGGTGAGATTAAGGCTCCCCTTGGATATGCTGAAACTGACCCAACTGGTCGATACGGTCGATTCAAGGACATTCTTGGCAGGGGAGCTATGAAAACTGTATACAGAGCATTTGATGAGTTCCTTGGGATTGAAGTGGCTTGGAACCAAGTCAAACTTGGTGATGTTTCTCATTCACCGGATCAACTTCAACGCCTTTATTCCGAAGTTCATCTTCTTAAGAACCTCAACCATAAGTCCATGATGATCTTCTATGGTTCTTGGATCGATATCAATGGAAAAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGCACTCTTAGAGAATATAGGCAAAGGTATAACAAAGTAGATATTCGAGCATTGAAGAATTGGGCGCGCCAGATTCTAAGTGGTTTGGAGTATTTACATAACAATAATCCTCCCGTGATACATCGAGACCTCAAATGTGATAATATATTTGTCAATGGCCATAAAGGAGAGGTCAAGATTGGTGACTTAGGTCTTGCAGCTATACTTTCTAGATCCCAAGTTGCTCAAAGTGTCATAGGTACTCCGGAGTTCATGGCACCAGAACTATACGAAGAGAAATACAATGAACTTGTAGATATATATTCTTTTGGGATGTGTATGATAGAGATGTTTACACTTGATTTTCCATACAGCGAGTGCTCAAATCCAGCTCAAATATACAAGAAAGTAACCGCGGGGAAGCTACCAAATGCATTTTTCAGAATCAAAGATTTAGAAGCACAAAGGTTTGTGGGAAGATGTTTATCACATGTCTCAAAGAGACCATCAGCAAAAGAACTATTGTTGGACCCATTTTTTGCCAAGGAACAACTTGAATTGTCATTGCCAAGCACAACATTATCTACAAATCAAACATTTAAGCATCTTTCTATAGGTGATCGAACAAGTAGAAATATGACAATCACTGGGTCCATAAATGAAGAGGATAACACAATTTTCCTTAAAGTGCGGATATGTGATGAAATAGGGCAAACAAGGCATATATTCTTTCCATTTGACACAAAAAATGACACTGCTATTAAGGTGGCAATGGAGATGGTAGAAGAACTTGAAATTAGTCACTTGGATCCATTAGAGATAGCTGCAATGATAGATAATGAGATATCAACATTATTTCCAACTTGGATGGATACTCATGGTAAGTGTGAGAATCAACTACAACATAGCTTTAACTATGAAGAAGATGATGATGATGATGATGTTAATAACCAAAATCCTTTTGTCTTGTCATCATCTTGTCCTTCTTCACCTCATGATTCTCTCACCAAGTCTATCTCTAAGACCCACTTTTGTGGGAAGCATGGCATGTTTCCTCAAGAATGGAATCAAGATCTATTTATTAATGATGATGGAAGCTCTCCAAGCTCAATGAATTCCTACAAGTGTTCAAATATCCAATATCATGAAGATGAGCATTGTCCAACAATAGTTGAAGAAGCCATATTCAAGCATAACAATCAAAATTGCACAAGATCATGCCAAATAGAAGAGGGAAAAACAAGTAATTTCACTAAACAATTTTTGTACCCGAAAATGGACTCCTGTGGTGGTTGTAGATGTGGTGGTGGGCATGGGTCGAGCCACCACAAATTGTCGAGGATAACAAAGAATCGTTTAAACATCGACGAACATAGGAGCTTGCAACTTCAACGATCACAATTATTGGAGGTGTACAAGAGACGGATGATCAACACAATTGCCACCATGGAGGGAATTGGATTTCAATATCCGGATGGACGTCGTACACGTTGA 1812 0.388 MYKGRFCTSGEIKAPLGYAETDPTGRYGRFKDILGRGAMKTVYRAFDEFLGIEVAWNQVKLGDVSHSPDQLQRLYSEVHLLKNLNHKSMMIFYGSWIDINGKTFNFITELFTSGTLREYRQRYNKVDIRALKNWARQILSGLEYLHNNNPPVIHRDLKCDNIFVNGHKGEVKIGDLGLAAILSRSQVAQSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMFTLDFPYSECSNPAQIYKKVTAGKLPNAFFRIKDLEAQRFVGRCLSHVSKRPSAKELLLDPFFAKEQLELSLPSTTLSTNQTFKHLSIGDRTSRNMTITGSINEEDNTIFLKVRICDEIGQTRHIFFPFDTKNDTAIKVAMEMVEELEISHLDPLEIAAMIDNEISTLFPTWMDTHGKCENQLQHSFNYEEDDDDDDVNNQNPFVLSSSCPSSPHDSLTKSISKTHFCGKHGMFPQEWNQDLFINDDGSSPSSMNSYKCSNIQYHEDEHCPTIVEEAIFKHNNQNCTRSCQIEEGKTSNFTKQFLYPKMDSCGGCRCGGGHGSSHHKLSRITKNRLNIDEHRSLQLQRSQLLEVYKRRMINTIATMEGIGFQYPDGRRTR* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2150 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 599 - -
Tpr6g2150 603 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Tpr6g2150 603 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2150 603 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2150 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Tpr6g2150 603 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Tpr6g2150 603 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2150 603 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Tpr6g2150 603 CDD STKc_WNK 26 286 - -
Tpr6g2150 603 PANTHER WNK KINASE 1 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2150 Tpr-Chr6 23220571 23225369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2150 16 420 MAP Kinase Kinase Kinase AT3G51630 64.029 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr6g2150 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2150 K08867 - gmx:100272206 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2150 6 23220571 23225369 Tpr4g1037 4 10021636 10028275 PCT