Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2135 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAGAAGTCTGATTCGTTTGCCTATGTAAAACGCATAAACCATAATGATCATGCGCCTTCAGTACTTCCTGAACCTCAAACTCATACTCGTTCACTACAGTCTGCACCTCCTAGTTTTAGGACAAGAGTGAAACCCGTTCAACCTGTTAATAAAGCCACTAACAATAGAATACGGGCATTATCTGCTCCTTCAACTCTTGATGCAGCCGATCAAGATGCTTTAACCTCAATTGAGTATGAGGAACAAGAAGAGTCAAAATACCGAGGAGGAGGATCAATGAAGGAGCAGCGTTCTTCTAGTCCACAACCTTTACCGCTACCATCTCCTCAGGGAGGTAGTTCACTGAAGGCTATTGGCAGCTTTAAGTTGGGGACTGCTAGTGTTCCTCTACATGCTTCTGGACCTTTGCCACTTCCACCAACTGGTTCACTTCGGAACTTTCCGTATGAGGAAGTTGCTGCTGCTTGCCACAATTTCTCTTCTGATCGATGCGTGTCAGAATGTCTTTCGTCTACAATATACAAAGCTTACTTTGGTGATGATCCTTCAAGTGCAAAGAAGTTTGAAGCCACTGTCACACGCCTTCACCCATCATCTCAGGGCTTGAAGGATTTCATTAACGAGGTCAATACTCTTGCAACTTTGCAACATCCAAACCTCTGTAAACTGCTAGGATTTCATGCTCGTGATGGTTCAGAACATAGAATGTTGGTCTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTATGGTAGATCTGATGGACCATCCATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCACAGGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCGACAGCCAACATACAGATTGACAAAGATTTCAGTGCCAAGCTTTCCGGATATGGTTGTGTCGGACATATTCCTGAGGAAGAGATTTCCAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTGACCCCAAAGAGCAACGTATGGAGCTTTGGAATTTTTCTTCTGGAGTTACTTACTGGAAGAAAGAATCTTGATAGCCGTCACCCTAAGGAAGAACGGAATTTAGTCAAATGGAGTAGGCCTTTCCTAGCTGATGATTATCGTTTATCATTGATCATGGACCCTCAACTTAAAGGTCGATTTCCTTCCAAAGCTGCAAGAACAATAGCTGACATTGCACAAAGATGCCTACAAAAGGAGCCATCAGATAGACCCACCATGAGAATCGTTGTTGAGCATCTCAAAACAATACAGGATTTGAAATACTCTTGCAGGTTCCCACTCCAAGAACCAGCACCATTATCCGGAAAAGAAATGTCAAGATCACCAAGTCTTAATGGTATCGTCTGCCCTGCGCCAAGGTTGAGTTTTTCTCCATCACAGCCGTCCGTAGCTCCGCTATCTGTTTCGCCTCCAAGATGGTCCGGTGTGCCTGTCCTTCCACCTCGAGTTTGTTCTTCTATGGAAGAACTCGATAGGCAAGAGAGCCGTAAGTCATCTTCCGCCTCTAGGAGGGCTAGTGTTGAAGGATATTGA 1629 0.4426 MGCFTVLKSKKKKSDSFAYVKRINHNDHAPSVLPEPQTHTRSLQSAPPSFRTRVKPVQPVNKATNNRIRALSAPSTLDAADQDALTSIEYEEQEESKYRGGGSMKEQRSSSPQPLPLPSPQGGSSLKAIGSFKLGTASVPLHASGPLPLPPTGSLRNFPYEEVAAACHNFSSDRCVSECLSSTIYKAYFGDDPSSAKKFEATVTRLHPSSQGLKDFINEVNTLATLQHPNLCKLLGFHARDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRIVVEHLKTIQDLKYSCRFPLQEPAPLSGKEMSRSPSLNGIVCPAPRLSFSPSQPSVAPLSVSPPRWSGVPVLPPRVCSSMEELDRQESRKSSSASRRASVEGY* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2135 542 MobiDBLite consensus disorder prediction 519 533 - -
Tpr6g2135 542 MobiDBLite consensus disorder prediction 31 51 - -
Tpr6g2135 542 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2135 542 MobiDBLite consensus disorder prediction 92 128 - -
Tpr6g2135 542 MobiDBLite consensus disorder prediction 25 80 - -
Tpr6g2135 542 PANTHER OS01G0822200 PROTEIN 44 541 - -
Tpr6g2135 542 SUPERFAMILY Protein kinase-like (PK-like) 149 457 IPR011009 -
Tpr6g2135 542 Gene3D Transferase(Phosphotransferase) domain 1 253 456 - -
Tpr6g2135 542 MobiDBLite consensus disorder prediction 516 542 - -
Tpr6g2135 542 PANTHER OS01G0588500 PROTEIN-RELATED 44 541 - -
Tpr6g2135 542 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Tpr6g2135 542 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Tpr6g2135 542 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2135 Tpr-Chr6 23071393 23076168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2135 149 449 Receptor kinase-like Gene Family AT4G02010 38.111 3.55e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Tpr6g2135 PK_Tyr_Ser-Thr 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2135 - - gmx:100809117 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2135 6 23071393 23076168 Tpr4g0789 4 7356938 7361141 PCT