Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2134 ATGAAAGTTAGAGATGTATATGAATCATTGTCTAATAGGCCAAAGTTGAGTATGACCCTTAATGCTCCTTTAGGAATTTCAAATTCCTTTGGTAATAGTAATAGTGTTGTTGGTGAAAAGCAAAGTAGTAAAACTTCAACTCCAAATCTATCAGAGTTAGAGAAAAATTTGTCCATGGCATCTTCCATTCATGTTGCACGACAATCACCTATAAGACGACGAAGGAAACACATATCTCCGCGTAATTTGCCTAAGATTACTGATCAAGAATTGCAGCAATTATCTGGAGATTTAAATTCCAAAATTGTGCCATTATTTGAGAAGACACTGACTTCCAGTGATGTTTGTCGACTCGGTCGCATGGTTCTTCCGAAACCATGTGTTGAAACATATTTTCCTCCTATTTCTCAACCAGGGGGTATTTACTTACATATTGAAGATGTGAAAGGGAAGAAATTGATGTTTAGGTTTAGATTTTGGCCAAATAATAACAGCAGGATATATGTTTTAGAAGGTGTACTTCCTTGGATTCAGTCTATGCAATTGCAAGCTGGAGATTTTGTAACATTTAGCAGGATGGACCCCGAGGAGAGACTGATAATAGGGTTTCGAAAGGCGTCAATTTCTTCTATAGAGGTGCATGACATTACTATGTCTAAGGGCAAGAAAAGAGAGGAAATGCATCTGCCAAAAGAGCTGGTTCCTAAGAAGAAAAGAAAATGTGACATTGGATCAAAAAGCAAGAGGCAGGTTCTTGATAACCAAGATGCATTGATGCTGAAACTTACTTGGCAAGAGGCTCAACATTTTCTTCATCCACCCCCTACAGTTAATTCAAACATTGTAGTGATTGAGGATCATGTTTTTGAAGAATATGAAGAACCTCCTATCATTGCAAAGAGAGGTATATTCATAAATGGAATGAATGAGCAATGGATACAGTGTGATAAGTGCTCAAAATGGAGGAAGTTGGAATTTCTGGTGCAATGCAATTGTGTTAACAAATCTTGTTCTTAA 1017 0.3707 MKVRDVYESLSNRPKLSMTLNAPLGISNSFGNSNSVVGEKQSSKTSTPNLSELEKNLSMASSIHVARQSPIRRRRKHISPRNLPKITDQELQQLSGDLNSKIVPLFEKTLTSSDVCRLGRMVLPKPCVETYFPPISQPGGIYLHIEDVKGKKLMFRFRFWPNNNSRIYVLEGVLPWIQSMQLQAGDFVTFSRMDPEERLIIGFRKASISSIEVHDITMSKGKKREEMHLPKELVPKKKRKCDIGSKSKRQVLDNQDALMLKLTWQEAQHFLHPPPTVNSNIVVIEDHVFEEYEEPPIIAKRGIFINGMNEQWIQCDKCSKWRKLEFLVQCNCVNKSCS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2134 338 MobiDBLite consensus disorder prediction 64 85 - -
Tpr6g2134 338 Gene3D - 84 209 IPR015300 -
Tpr6g2134 338 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 2 326 - -
Tpr6g2134 338 SMART B3_2 106 207 IPR003340 GO:0003677
Tpr6g2134 338 CDD B3_DNA 104 205 IPR003340 GO:0003677
Tpr6g2134 338 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 2 326 - -
Tpr6g2134 338 Pfam B3 DNA binding domain 106 206 IPR003340 GO:0003677
Tpr6g2134 338 SUPERFAMILY DNA-binding pseudobarrel domain 103 205 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2134 Tpr-Chr6 23067081 23069808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2134 10 324 B3 DNA Binding Superfamily AT4G32010 46.369 1.18e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr6g2134 B3 3e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2134 - - mtr:MTR_7g073240 481.485