Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2129 ATGTTTTGTTCTACAAAGATGTTGAAATTCAGTTTGTTTTTTTTGAGTATTTTTGGTTTGGTTCTGGTTTCAGTGTTTTCTGTTGATGATCCTGTTTTCAATGATGAAATAATGGGATTAATTGTGTTTAAAGCTGGTTTACAAGATCCTAATCATAAACTAATTTCATGGAATGAAGATGATTACACACCTTGTAATTGGGAAGGTGTGAAATGTGATTCTTCAAACAATAGAGTTATTTCTATTGTTCTTGATGGATTTTCTCTTTCAGGACACATTGATAGAGGTTTATTGAGATTACAGTTTCTTCAAACTCTTTCACTTTCTGGTAACAATTTCACAGGTTTCATAAACCCTGATCTTCCTAAACTTGGAAATTTACAAGTTGTTGACTTTAGTTATAACAATCTTAAAGGGTCAATTCCTGAAGAGTTTTTTCAACAATGTGGATCTTTGAAAACTGTTAACTTTGCTAAGAATAATCTTACAGGTAAAATTCCTGATTCTCTTAGCTTATGTAACACTTTGACAAATGTTAACTTTTCTTATAATCAAATTTATGGAAATTTGCCATCTGAGGTTTGGTTTTTGAGAGGTTTACAATCACTTGATGTTTCAAATAATTTGCTTGATGGAGAAATTCCTAAGGGGATTCACAACCTTTATGATTTGAGGGAATTGAGTTTGAAGAAAAACCGTTTTAGTGGTCGAATTCCCGAGGATATTGGTGGTTGCATAGTTTTGAAATCGCTCGATTTGAGTGGTAATTTTCTGTCTGGTGGAATTCCTCAATCAATGCAACAATTGAATTCTTGTAATTCTCTCATTTTGCAAGGAAATTCATTCACTGGTAATATCCCTGATTGGATTGGAGAGTTGAAAGATCTAGAAATATTGGATCTTTCTGAAAATAGATTTTCTGGTTGGATTCCAAAGTCATTAGGGAATCTTGAAATGCTGCAAAGATTGAATTTTTCGAGGAATCAGTTAACAGGAAACTTGCCGGATTCAATGATGAATTGTACTAAGCTTTTGGCTTTTGACATCAGTCAAAATCATTTGGATGGTTATCTTCCTTCATGGATTTTTAGGAAGGGTAATTATCATGGTCTCGAGGTTTTGGATTTGTCTTCCAATGGATTTTCTGGTGGACTTCCGTCTAATATCGGTGGTCTTGGTAGTTTGAAAATCTTGAATTTGTCTACCAACTATTTCTCTGGTTCTATTCCTGGTGGGATAGGTGAACTCAAATCTTTATACATTGTTGACTTGAGTGACAATGCGCTTAATGGAAGCATTCCTTTTGAAATAGAAGGTGCAATTTCACTCGGTGAATTGAGGCTACATAAGAATTCCCTTGGTGGGAGAATTCCCGAACAAATCGCGAAGTGTTCATCTCTAACAACTTTGGTTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCGGCCATTGCAAACCTAACCAATCTTCAGCATGTAGATTTGTCGTGGAATGAGCTCTCTGGTAGTCTACCAAAGGAGCTGACAAATCTTTCCAATCTTTTGTCATTTAATGTGTCTTACAACCACCTTCAAGGCGAGTTACCGGTCGGTGGGTTCTTCAACACCATCTCCTCTACATCTGTTACCGGTAACGCATTGTTGTGTGGTTCTGTTGTCAATCACTCCTGTCCGTCGGTTCATCCGAAACCTATTGTCTTGAATCCCAACTCTTCAGCTTCCAACTCCAGCGTTTCCTCAAAATATCATCGACACAAGATCATTCTTAGTATATCTGCTCTTATTGCTATTGGTGCAGCTGCTTTTATTGCAGTTGGCGTTGTGGCTATCACTTTCCTAAATATGCGCGCCCGTTCTGCAATGGAACGATCTGCTGCTCCATTTGCATTCTCCGGTGGTGATGACTATACAAATTCTCCGGAGAATGATCCGAACTATGGCAAACTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCTCATAATCTCCTTAATAAAGAGAGTGAAATAGGCCGTGGTGGATTTGGAGTTGTTTATCGCACTTACCTTCGAGACGGGCATGCTGTTGCAATCAAGAAGCTGACAGTCTCAAGTTTGATCAAGTCTCAAGAAGAGTTCGAGAAGGAAGTGAAAAGGTTTGGGAAGATTCGGCACCAGAATCTTGTGGCACTCGAAGGTTATTATTGGACTTCATCGTTGCAGCTTCTCATTTACGAGTACCTATCAAGTGGTAGCTTGCATAAGCTTCTGCACGACAATACCAACAAAAATGTCTTATCTTGGCGACAAAGGTTCAAGATTATTCTCGGCATGGCAAAAGGGTTGGCACATTTGCACGAAACAAACATTATCCACTATAATCTAAAATCAACCAATGTTCTCATCGACTCTTCCGGCGAGCCAAAGATCGGTGATTTCGGCCTGGTGAAGCTCTTACCAATGCTAGACCATTGTGTGTTAAGCAGCAAAATTCAAAGTGCGCTCGGATACATGGCTCCTGAGTTTGCTTGCCGCACAGTTAAGATAACCGAGAAATGCGACGTGTACGGTTTCGGAATCCTTATTTTAGAGATAGTGACAGGAAAAAGACCTGTGGAATACATGGAAGATGATGTGGTGGTTCTATGTGACATGGTGAGGGGTGCATTGGAAGAAGGAAAGGTTGAACAATGTATCGATGAAAGACTTTTAGGTAATTTTGCTGCTGAAGAAGCAATTCCTGTGATAAAACTAGGGTTGATTTGTGCATCACAAGTTCCATCAAATAGGCCTGATATGAGTGAGGTTATCAACATTTTAGAGTTAATTCAGTGCCCTTCAGAAGGCCAAGAGGAACTATTAGAATGA 2856 0.388 MFCSTKMLKFSLFFLSIFGLVLVSVFSVDDPVFNDEIMGLIVFKAGLQDPNHKLISWNEDDYTPCNWEGVKCDSSNNRVISIVLDGFSLSGHIDRGLLRLQFLQTLSLSGNNFTGFINPDLPKLGNLQVVDFSYNNLKGSIPEEFFQQCGSLKTVNFAKNNLTGKIPDSLSLCNTLTNVNFSYNQIYGNLPSEVWFLRGLQSLDVSNNLLDGEIPKGIHNLYDLRELSLKKNRFSGRIPEDIGGCIVLKSLDLSGNFLSGGIPQSMQQLNSCNSLILQGNSFTGNIPDWIGELKDLEILDLSENRFSGWIPKSLGNLEMLQRLNFSRNQLTGNLPDSMMNCTKLLAFDISQNHLDGYLPSWIFRKGNYHGLEVLDLSSNGFSGGLPSNIGGLGSLKILNLSTNYFSGSIPGGIGELKSLYIVDLSDNALNGSIPFEIEGAISLGELRLHKNSLGGRIPEQIAKCSSLTTLVLSHNKLTGSIPAAIANLTNLQHVDLSWNELSGSLPKELTNLSNLLSFNVSYNHLQGELPVGGFFNTISSTSVTGNALLCGSVVNHSCPSVHPKPIVLNPNSSASNSSVSSKYHRHKIILSISALIAIGAAAFIAVGVVAITFLNMRARSAMERSAAPFAFSGGDDYTNSPENDPNYGKLVMFSGDADFADGAHNLLNKESEIGRGGFGVVYRTYLRDGHAVAIKKLTVSSLIKSQEEFEKEVKRFGKIRHQNLVALEGYYWTSSLQLLIYEYLSSGSLHKLLHDNTNKNVLSWRQRFKIILGMAKGLAHLHETNIIHYNLKSTNVLIDSSGEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCIDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMSEVINILELIQCPSEGQEELLE* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2129 951 ProSiteProfiles Protein kinase domain profile. 667 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2129 951 SUPERFAMILY L domain-like 51 362 - -
Tpr6g2129 951 Pfam Leucine Rich Repeat 200 221 IPR001611 GO:0005515
Tpr6g2129 951 Pfam Leucine Rich Repeat 248 268 IPR001611 GO:0005515
Tpr6g2129 951 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515
Tpr6g2129 951 Gene3D Ribonuclease Inhibitor 313 564 IPR032675 -
Tpr6g2129 951 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 20 941 - -
Tpr6g2129 951 CDD STKc_IRAK 673 939 - -
Tpr6g2129 951 SMART LRR_typ_2 392 416 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 317 341 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 293 316 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 124 148 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 488 511 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 512 536 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 197 220 IPR003591 -
Tpr6g2129 951 SMART LRR_typ_2 221 245 IPR003591 -
Tpr6g2129 951 Pfam Protein tyrosine and serine/threonine kinase 668 876 IPR001245 GO:0004672|GO:0006468
Tpr6g2129 951 Pfam Leucine rich repeat 274 330 IPR001611 GO:0005515
Tpr6g2129 951 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Tpr6g2129 951 Gene3D Phosphorylase Kinase; domain 1 652 743 - -
Tpr6g2129 951 Gene3D Transferase(Phosphotransferase) domain 1 744 948 - -
Tpr6g2129 951 SUPERFAMILY Protein kinase-like (PK-like) 668 940 IPR011009 -
Tpr6g2129 951 Gene3D Ribonuclease Inhibitor 34 312 IPR032675 -
Tpr6g2129 951 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Tpr6g2129 951 SUPERFAMILY RNI-like 262 527 - -
Tpr6g2129 951 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Tpr6g2129 951 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 20 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2129 Tpr-Chr6 23027215 23031385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2129 15 947 Receptor kinase-like Gene Family AT5G01890 60.540 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Tpr6g2129 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2129 - - mtr:MTR_7g073290 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2129 6 23027215 23031385 Tpr4g1023 4 9850389 9854960 PCT