Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2123 ATGGAAAATATTGAAAATCTAGCTCATGGTCGTGGAAAAGTAATTGATGAGTTGTTAAGGGGTCGTGAATTAGCAAATCAACTTAGACATCTTCTCAATGAAAGTGGTGATATTGATCATAATAATAATGATTCAACAACACCATTTGCTGAAAATCTTTTGAAGGAAGTGCTTATGACTTTTACAAATTCACTCTTGTTCTTGAACAATAATAATCTTACTTCAGATGTTTCTGATGCTCAACTCACCAAATCTGAGGATTCTTTGGAGAGTAATTGCAAGAGTACATCCATTGTTAAGGAACGAAGAGGTTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAAGGAATCTGAACAACCAGAGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATCCTCCACAATGATTTCCCAAGGAACTACTATAGGTGCACTCACAAATATGAACAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATTCAAGAAGATCCACTTCTTCACAAAACAACCTATTATGGCCATCACACTTGTAGACTCATACAAAACCCTGAAATCATAGTAGATTCACTTTCTCCTGCTCATCACTCTTCCATGTTCCTTAGCTTTGACAACTCTTTCCCAACACCAACAAAACAAGATTGCCCTTTTCTCTCAACTTCTTCTCATCCATCATCAACATCATCATCAGTGAAAAAAGAGGAGTGCAAGGAAGAGATTGTTAATCCTCCTCCTCCTCCTCCTCCCCCTCCTTCATCTTCCCACAATGATTACCTTTCTGGACTCACTTTCGATGATTCCGATAGACATGTGACACTATCATCAACACTTGATTCTCATGATCACCTTGGTGTCAATATTTCTGATATTTTGTATGATGATGTCCTCAATTGGCCTCTTTCTTGA 921 0.3746 MENIENLAHGRGKVIDELLRGRELANQLRHLLNESGDIDHNNNDSTTPFAENLLKEVLMTFTNSLLFLNNNNLTSDVSDAQLTKSEDSLESNCKSTSIVKERRGCYKRRKVSQTWEKESEQPEEDGHQWRKYGQKKILHNDFPRNYYRCTHKYEQGCKATKQVQKIQEDPLLHKTTYYGHHTCRLIQNPEIIVDSLSPAHHSSMFLSFDNSFPTPTKQDCPFLSTSSHPSSTSSSVKKEECKEEIVNPPPPPPPPPSSSHNDYLSGLTFDDSDRHVTLSSTLDSHDHLGVNISDILYDDVLNWPLS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2123 306 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 300 - -
Tpr6g2123 306 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2123 306 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g2123 306 ProSiteProfiles WRKY domain profile. 118 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2123 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 300 IPR044810 GO:0003700
Tpr6g2123 306 MobiDBLite consensus disorder prediction 223 259 - -
Tpr6g2123 306 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2123 306 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2123 Tpr-Chr6 22955138 22957728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2123 13 206 WRKY Transcription Factor Family AT3G56400 38.462 2.13e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g2123 WRKY 4.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2123 - - mtr:MTR_7g073430 453.366