Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2117 ATGGTTTCCCTACTCTCTACAACAACTACAACCACACTTCAACACACTCATAACAAAATCTGCTTCTCTCCTCTAAAATTCTCCACCTCATTTAACAATTCTTTCTTAACAAACCATTTCAACAACACTCATTCTATAAGGTGCAGTGCATTTTTTGATATCATCCCCAAAGACATACTATTGAACAACACTTTTTATTTGGATAAGTTTCAGACTTTGAGTGAGGACTTATCAGACATTCAGAGGTTGGAGATTTTGGTCTTTGTTGGGTTATCATGGTTATACTTAACTGCAAGACCAGGTGTTCTTTTTGGTGCTATTGATGCATACCTTTTGGCTCCAATGCAATTGGTTTTGGATAGTTTATCTGGAAGGAGAAACATGAAAAGGAGTGATTTCTTGATTGGAGGTAAGATAGGAGAAGGGTCATTTGGTGTTGTTTATTCTGCTGTTTTGGTAACAAAGATAAAAGAGAGTGGAAGAGGGAAATTAGATGCTAAATCTAAGGATAAAGTCATTCTTAAAAAGGTCAAGGTTGGAATTGAAGGGGCTAAAGAATTTGGTGATTTTGAAGAGTGGTTTAATTACAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTCCTTGGAAGTTTTGTAGCTGATAAAAGCAATTCACAATTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTCGAGGGAGACAGTACTCTTGCTGATTACATGACAGATAAAAACTTCCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGAGTCTTACAAGGTGTAGATTCTTCTAAAAGAAATGCATTGATCATCAAGCAAATAATGCGCCAAATCATTACATCCCTTAAGAAAATTCATGACACTGGCATTGTTCATAGAGATGTAAAGCCTTCCAACTTGGTTGTTACAAAAAAAGGGCAGATCAAACTCATTGATTTTGGTGCAGCAACAGACCTTAGAATTGGAAAGAATTTTGTTCCTAATTATACTCCTTTGGATCCTGATTACTGTCCCCCTGAACTATATGTGCTACCACAAGAAACACAAAGTCTTCCTCCAGAGCCAATTGCGGCTCTACTTTCACCAATCCTGTGGCAGTTAAACAGTCCTGATCTCTTTGATATGTATTCTGCTGGGATTGTACTTTTACAAATGGCAATACCAACTTTAAGGTCTCAAGCTGCTTTAAAGAATTTCAATTTGGAAATGAGGACATGTGGATATGACTTAAACAAATGGAGAGACTCTACTCGAATGAAGTCTAACTCCGAAATACTTGACAGCGATTCTGGTAGAGGATGGGACTTAGCATCAAAGCTTATCTCCAAGAGAAGTTCCGAAAGAACACGGCGTTTATCTGCTGCTTCTGCTTTGAGACATCCTTATTTTCTTCTAGGTGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTCAGCTTTAGCACAAAGTGA 1458 0.3786 MVSLLSTTTTTTLQHTHNKICFSPLKFSTSFNNSFLTNHFNNTHSIRCSAFFDIIPKDILLNNTFYLDKFQTLSEDLSDIQRLEILVFVGLSWLYLTARPGVLFGAIDAYLLAPMQLVLDSLSGRRNMKRSDFLIGGKIGEGSFGVVYSAVLVTKIKESGRGKLDAKSKDKVILKKVKVGIEGAKEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKSNSQFTKGGKWLVWKFEGDSTLADYMTDKNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKKGQIKLIDFGAATDLRIGKNFVPNYTPLDPDYCPPELYVLPQETQSLPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSQAALKNFNLEMRTCGYDLNKWRDSTRMKSNSEILDSDSGRGWDLASKLISKRSSERTRRLSAASALRHPYFLLGGDQAAAVLSKFSFSTK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2117 485 SMART serkin_6 133 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2117 485 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 7 483 IPR044803 GO:0004674|GO:0009579
Tpr6g2117 485 Gene3D Phosphorylase Kinase; domain 1 121 233 - -
Tpr6g2117 485 Gene3D Transferase(Phosphotransferase) domain 1 264 468 - -
Tpr6g2117 485 CDD STKc_SNT7_plant 138 466 - -
Tpr6g2117 485 ProSiteProfiles Protein kinase domain profile. 133 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2117 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Tpr6g2117 485 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 7 483 - -
Tpr6g2117 485 SUPERFAMILY Protein kinase-like (PK-like) 130 467 IPR011009 -
Tpr6g2117 485 Pfam Protein kinase domain 273 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2117 Tpr-Chr6 22896941 22900832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2117 133 322 MAP Kinase Kinase Kinase AT3G13530 24.870 3.05e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Tpr6g2117 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2117 - - gmx:100795624 724.931