Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2103 ATGTTATGTTATATATACCTTTGTGTTAATTCAGTTTTTTTCACTGTGACTAATTCAGTTTTTGCTTTGAATTGGTATACTGTGATGTGGGTTCTAAGAGTTTATGGATATGCTTTGGCATTTTCATTTTGTTTCATCACACTCATGGCAGCTTCACAAAGAACACATCCTTCAGAAGTAAAAGCACTGGTAGACATCAAAAAGAGTTTGATTGATCCGATGGATAAACTGAGGAACTGGAATAAGGGTGATCCATGTGCAGCAAACTGGACTGGAGTTTGGTGTTTTGATAAGAAGGGTGATGATGGTTACTTCCATATCCGTGAACTCTACTTGATGACTTTGAATCTCTCGGGAACTCTAGCACCTCAGCTTGGTCTTCTCTCCCATCTTGAGATAATGGATTTCATGTGGAACAATCTGACCGGCACAATACCAAAGGAGATTGGCAACATTAAATCATTGAAACTCTTGCTTCTGAATGGAAATCAATTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTTCAAATATGAATAGACTCCAACTGGATGAAAACCAATTGTCAGGTCCTGTGCCCGAATCATTTGCCAACTTGGTCAATGTTAGACACCTCCACATGAACAACAACTCATTCAATGGTCAAATTCCACCCAAACTTTCAAACCTATCCAATCTTATGCATTTGCTTTTGGACAACAATAACTTATCTGGATATCTTCCACCAGAATTCTCGAAGTTACAAAGTTTGGCAATACTCCAACTTGATAACAATAATTTCAGCGGGAATGGAATTCCTTCTAGCTATGAAACTTTCCCTAGGCTTGTAAAACTGAGTCTAAGAAATTGCAGTCTGCAAGGACCTATTCCTAATTTGAGTTCAATACCAAGACTTACATACGTGGATCTAAGCTGGAATCAGTTCAGTGGACCTATACCATTATATAAACTTGCAGACAATATGACAACTGTTGATTTGTCCCACAACAAACTCAATGGAACAATTCCACGAGGCGTGGTATATCCTCATCTTCAAAGATTGCAACTAGAGAACAATTTACTGACTGGGTCCTTCCCTACTACCATATGGCAGAATATATCCTTCAGCAGGAAGGCGAAACTTATAATTGATATTGGTAACAACTTACTTTCTGACATTTTTGGAGATCTGAATCCCCCGGAAAATGTAACCTTAAGGCTTTCTGGAAATCCTGTTTGCAAGAATTCCAACATACAAAGAATTGGCCAATTTTGTGTTCTTGAAGGGCGTGACATAGATGAAGAATTTGCAAATTCAACCATCTGTCCCAGTCAATCTTGTCCATTCGACAATTTCTATGAATTTGCACCCTCCCAAATTCATTGTTTTTGTGCAGCACCTATAAGAATTGGATATAGGCTAAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATAAAACTCGTTTCGAATCATACATAACTGATTCCTTAAACTTAAGCATCTACCAGTTATCAATAGATTCTTATGAATGGGAAGAAGGACCTCGTCTTAGAATGAATTTAAAAATTTACCCTTCATTCAACGAATCTCACTCCAACACATTCAGCCCAAACGAGGTCCGTCGCATTAATATCATATTTTCATCATGGAGATTTCCTCGCACGGATTTTTTTGGACCATATGAACTCCTGAATGTCACTCTTCTAGGACCATATGCAAATATCATTATTAATACAGAGAGCGGAAAGAGAAAAACAGGCATACTAGTTGCTATTATAATAGCAGCTGTTGCTTGTGTTTTAGCAATATCTGCATTAATCATGCTTCTAATGTTTAGAAGAAATGTGAAATACCAGCATTTGATTTCCAGGAAGCGTATGTCCTCTAGTGTATGTATCAAAATAGATGGTGTGAAATCATTCACTTTGAAAGAGTTGACTCATGCTACCAACAAATTTGATATCTCAAGTAAAGTCGGTGAAGGAGGTTATGGAATTGTCTATAAGGGCATTTTATCTGATGAAACATTTGTTGCCGTTAAACGAGCAGGAGAAAATTCATTACAAGGACAAAAAGAGTTTTTGACTGAGATTGAGCTTTTGTCAAGGTTGCATCATCGAAATCTTGTCTCACTAACTGGCTACTGTAATGAAGACGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGAATGGATTTCTGGTAAAAGTAAAAAGTGCAAGGAAGGCCTAAGTTTTTTCATGAGATTACGGATTGCAATGGGTGCCTCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATACCACAGAGATATTAAAGCCAGTAACATACTTCTAGACTCTAACTTTACAGCTAAAGTGGCTGATTTTGGATTGTCGCGGCTTATACCATACTCAGATGAAGATGGTCATGTACCTAATTATGTGTCAACAGTTGTGAAGGGAACACCGGGTTACCTGGACCCAGAATATATGATGACTCATAAGTTAACTGATAAAAGTGATGTATACAGCCTAGGAATTGTGTTTTTGGAGCTTTTGACCGGCATGCATCCAATATCACGTGGGAAAAACATTGTCCGCGAGGTTAATCTAGCTTGTCAATCTGGCAAGATAGATTCAATTATAGACAACAGAATGGGCGAATATCCACCTGAATGCTTAGACAAGTTCTTAGCTCTGGCCCTCAGTTGCTGTGAAGACCATCCAGAAGAGAGACCATCAATGATAGATGTGGTGAGGGAATTGGAAGACATTATTGCCTTGTTACCTGAAACTGAAATTAGTTTATCAGATGTTTCCTTAGATAATTCTGGTAAAATGGCACCGCCGTCTTCATCATCATCATCATCTGCAACAACATCAGGATTCATTACGACAAGAAAAGACCAACAGCACATGTCTTCATATGTGTCAGGAAGTGATCTTGTCAGTGATGTCATTCCGACTATTGTTCCTCGTTGA 2973 0.3851 MLCYIYLCVNSVFFTVTNSVFALNWYTVMWVLRVYGYALAFSFCFITLMAASQRTHPSEVKALVDIKKSLIDPMDKLRNWNKGDPCAANWTGVWCFDKKGDDGYFHIRELYLMTLNLSGTLAPQLGLLSHLEIMDFMWNNLTGTIPKEIGNIKSLKLLLLNGNQLSGSLPDELGNLSNMNRLQLDENQLSGPVPESFANLVNVRHLHMNNNSFNGQIPPKLSNLSNLMHLLLDNNNLSGYLPPEFSKLQSLAILQLDNNNFSGNGIPSSYETFPRLVKLSLRNCSLQGPIPNLSSIPRLTYVDLSWNQFSGPIPLYKLADNMTTVDLSHNKLNGTIPRGVVYPHLQRLQLENNLLTGSFPTTIWQNISFSRKAKLIIDIGNNLLSDIFGDLNPPENVTLRLSGNPVCKNSNIQRIGQFCVLEGRDIDEEFANSTICPSQSCPFDNFYEFAPSQIHCFCAAPIRIGYRLKSPSFSYFPPYKTRFESYITDSLNLSIYQLSIDSYEWEEGPRLRMNLKIYPSFNESHSNTFSPNEVRRINIIFSSWRFPRTDFFGPYELLNVTLLGPYANIIINTESGKRKTGILVAIIIAAVACVLAISALIMLLMFRRNVKYQHLISRKRMSSSVCIKIDGVKSFTLKELTHATNKFDISSKVGEGGYGIVYKGILSDETFVAVKRAGENSLQGQKEFLTEIELLSRLHHRNLVSLTGYCNEDGEQMLVYEFMPNGTLREWISGKSKKCKEGLSFFMRLRIAMGASKGILYLHTEANPPIYHRDIKASNILLDSNFTAKVADFGLSRLIPYSDEDGHVPNYVSTVVKGTPGYLDPEYMMTHKLTDKSDVYSLGIVFLELLTGMHPISRGKNIVREVNLACQSGKIDSIIDNRMGEYPPECLDKFLALALSCCEDHPEERPSMIDVVRELEDIIALLPETEISLSDVSLDNSGKMAPPSSSSSSSATTSGFITTRKDQQHMSSYVSGSDLVSDVIPTIVPR* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2103 990 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Tpr6g2103 990 SUPERFAMILY Protein kinase-like (PK-like) 632 949 IPR011009 -
Tpr6g2103 990 SMART serkin_6 647 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2103 990 CDD STKc_IRAK 653 922 - -
Tpr6g2103 990 Pfam Protein kinase domain 649 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2103 990 Gene3D Ribonuclease Inhibitor 56 212 IPR032675 -
Tpr6g2103 990 Gene3D Transferase(Phosphotransferase) domain 1 723 932 - -
Tpr6g2103 990 Gene3D Ribonuclease Inhibitor 213 316 IPR032675 -
Tpr6g2103 990 Pfam Leucine rich repeat N-terminal domain 57 95 IPR013210 -
Tpr6g2103 990 SUPERFAMILY L domain-like 73 423 - -
Tpr6g2103 990 MobiDBLite consensus disorder prediction 939 959 - -
Tpr6g2103 990 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 39 954 - -
Tpr6g2103 990 ProSiteProfiles Protein kinase domain profile. 647 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2103 990 Gene3D Phosphorylase Kinase; domain 1 618 722 - -
Tpr6g2103 990 Gene3D Ribonuclease Inhibitor 317 407 IPR032675 -
Tpr6g2103 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Tpr6g2103 990 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 39 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2103 Tpr-Chr6 22763924 22771663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2103 33 930 Receptor kinase-like Gene Family AT5G01950 59.735 0.0 1070
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tpr6g2103 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2103 - - gmx:100815005 1395.95