Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2082 ATGATGATGCCGAAAAAATATGAAGGATATGCTGTGGGAATCGATCTTGGTACAACATATTCTTGTGTTGCAGTGTGGCATGAGCAACACAGTAGAGTGGAGATTATTCACAATGATCAAGGCAACAGAACTACACCTTCTTGTGTTGCTTTCACTGACAAACAAAGGTTGATTGGCGATGCAGCTAAGAATCAAGCTGCTACCAACCCACAAAATACTATCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTCAGCGATGATGTTGTTCAAAAAGATATCAACTTATGGCCGTTTGAAGTCATTGATGATGAAAACAACAAGCCTATTGTTGTTGTTCAGTACAAGGGTCAGGAGAAGCACCTATGTGCAGAGGAAATATCTTCAATGGTTCTAACAAAAATGCGGGAAATTGCAGAGGCATATTTGGAATCACCAGTTAAGAATGCAGTCATTACTGTGCCAGCTTATTTCAATGATTTTCAACGAAAAGCCACCATAGATGCCGGTGCTATTGCTGGCCTTGATGTTATGAGGATAATGTGCGAGCCTACTGCAGCAGCTGTTGCATATAGTCTTGACAAGAGAACTAATTGTGCTGGAGAACGAAATATTTTTGTGTTTGACCTTGGTGGTGGAACTTTTGATGTGTCACTTGTTACAATTAAGGATAAGGTTTTCCAAGTTAAGGCTACTGCTGGAAACACTCACCTAGGTGGAGAGGACTTCGACAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAGCGGAAGAAAAAAGTGGACATTAGTGGCAACCCAAGAGCCTTGAGAAGGTTGAGAACAACCTGTGAGAGGGTTAAAAGGATCCTCTCTTTTTCAGTTGACACAACTATTGAGGTAGATGCTTTATTTGAGGGCATTGACTTCTCTTCATCGATCACTCGTGCAAAGTTTGAGGAAATCAATATGGATCTTTTCAATGAATGTATGGAAACTGTTGAGAGTTGCCTTAATGACTCTAAGATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAGCAACTATTGAGGGACTTTTTTAAGGGAAAGGATCTGTGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTTTGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGATGGAATTAAAAATGCTCCAAACTTGGTGTTGATCGATGTTACACCACTGTCTTTAGGTTTGGAGGTAAATCATGATTGCATGGAGGTAGCGATTCCTAGGAACACTACTATACCCGTCAAAAAGACATTAAATTGTCGGACAACTAAAGATAACCAATCCACAGCATCGATAGAGGTTTATGAGGGTGAGAGAGCTATAGCCAGCGAAAACAATTTGCTTGGTTCTTTTAAGCTCTCTGGATTGTCCCCTGCTCTTCGTGGCCACCCTATGTGTGTATGTTTTTCTGTTGATGAAAACGGTATTTTGACAGTTTCAGCTAAGGAAGTTTCCACCGGCATCATGAATGAGATTATAATAACCAATTACAAGGAGAGGTTATCAGCAGCAGAAATTAAAGAATTGATTCAAGAAGCTGACAATTACCGTGCTGAAGATGAGAAATTCCAACAAATGGCTAAAGTAAAGAGTGCGTTGGATTTCTGTGTTTACAAAATTGAATCTGCTTTAAAGAAGCAGAATATTAACTTTAAGCTCTCTACACCAGAGAACAAGAAGATCAATGTTGCAATTAGAATGGCAAAAAAATTGCTTGATGAGAATGACCTGCATGAAGTAGATCTTCTTGAGGATCATTTGGAGAACCTTGAAAGTATGTTTGAAGACATTACAGCCAAGATTGGTTAG 1860 0.4005 MMMPKKYEGYAVGIDLGTTYSCVAVWHEQHSRVEIIHNDQGNRTTPSCVAFTDKQRLIGDAAKNQAATNPQNTIFDAKRLIGRKFSDDVVQKDINLWPFEVIDDENNKPIVVVQYKGQEKHLCAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDFQRKATIDAGAIAGLDVMRIMCEPTAAAVAYSLDKRTNCAGERNIFVFDLGGGTFDVSLVTIKDKVFQVKATAGNTHLGGEDFDNRMVNYFVEEFKRKKKVDISGNPRALRRLRTTCERVKRILSFSVDTTIEVDALFEGIDFSSSITRAKFEEINMDLFNECMETVESCLNDSKMDKSSVDDVVLVGGSSRIPKVQQLLRDFFKGKDLCKSINPDEAVAFGAAVQAALLSDGIKNAPNLVLIDVTPLSLGLEVNHDCMEVAIPRNTTIPVKKTLNCRTTKDNQSTASIEVYEGERAIASENNLLGSFKLSGLSPALRGHPMCVCFSVDENGILTVSAKEVSTGIMNEIIITNYKERLSAAEIKELIQEADNYRAEDEKFQQMAKVKSALDFCVYKIESALKKQNINFKLSTPENKKINVAIRMAKKLLDENDLHEVDLLEDHLENLESMFEDITAKIG* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2082 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 550 IPR029047 -
Tpr6g2082 619 PANTHER HEAT SHOCK 70 KDA PROTEIN 6 617 - -
Tpr6g2082 619 PANTHER HEAT SHOCK PROTEIN 70KDA 6 617 IPR013126 GO:0005524|GO:0140662
Tpr6g2082 619 Gene3D - 196 370 - -
Tpr6g2082 619 SUPERFAMILY Actin-like ATPase domain 9 195 IPR043129 -
Tpr6g2082 619 Coils Coil 597 617 - -
Tpr6g2082 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 546 IPR029047 -
Tpr6g2082 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 14 21 IPR018181 -
Tpr6g2082 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 207 220 IPR018181 -
Tpr6g2082 619 Gene3D - 547 619 IPR029048 -
Tpr6g2082 619 SUPERFAMILY Actin-like ATPase domain 201 391 IPR043129 -
Tpr6g2082 619 Pfam Hsp70 protein 11 617 IPR013126 GO:0005524|GO:0140662
Tpr6g2082 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 344 358 IPR018181 -
Tpr6g2082 619 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 618 IPR029048 -
Tpr6g2082 619 Gene3D - 12 388 - -
Tpr6g2082 619 Coils Coil 523 543 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 10 23 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 40 52 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 62 70 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 150 170 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 213 223 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 341 357 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 373 393 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 399 418 - -
Tpr6g2082 619 PRINTS 70kDa heat shock protein signature 479 495 - -
Tpr6g2082 619 Gene3D Actin; Chain A, domain 4 239 322 - -
Tpr6g2082 619 Gene3D - 75 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2082 Tpr-Chr6 22579565 22583453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2082 3 618 Calmodulin-binding Proteins AT3G12580 64.239 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2082 K03283 - gmx:102667578 858.981