Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2077 ATGGCTGCTTGTGCTTTGTTCAATGGTGGTGGAAATAGTGATGAAACCAATTTGAGCAACAACAACAATAATAGTACTGCTTCTAACTCCAGCAACATAAGCAGTGAAGATTTACACCACAACATGTTACAAACACAACCTCATCATTCTGAAAGAAAATTACTCAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACTTCACAACAACAACAATTCTTCTTCTGATAATTATCATAGATTTCCTCGTCGCAACAACAACAACAACATATCCTCATTGAATTGCTCTTTACCCTCAGCCACACAAAAAGGTGTCACTACAACAACAACAACAACAACAACAACATTATTAGCCGCAGGTACAAACAATAGTACTAGTACTAATAATAATAACTATCATTATCATAACAATAATATTAATAATAATAATAATAGTAATGTTGCTTTGTCACGAGATAACGTTTGTATTCAAAATTACCCAACTGTATCCGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCTTCTTCCAACAATCTCAACAATTCCTCAAACTCTGCTTCAAACTACACCCATTTTCAACAACCACTTGTAGAAGAACAAAACAACCCTCTTCCTTCAATCTGTGGATTCTCTGGTTTACCACTTTTTCCATCTCAAAATCAAACCAACAATAACAACAGAAACAATGGTAGTAGTAACATAATAACTTGTGCAGCTGCTAATATTGTTGATGTTGTTTCACCTTCTATGATGGAAGAAACCTCGGCTACAACAAATTGGATTGATGGTATTCTAAAAGATCTTATTCATACTTCTAACAGTGTTTCCATTTCTCAACTCATCAATAATGTTAGAGAGATTATATATCCTTGTAATCCAAATCTTGCTCTTGTTCTTGAACATAGACTTCGTCTTCTCACTGAAACTATACCACAAAATTGTTCATCATCTGTTGTTACAGAGAGAAAAAGAAACAACACAGAACAACAACAACAACAAAGTGTTGTTAATGTTAATGTTTTAGCAGCTCCTAATGTTAATTCCTCAGTGAAACTTATGAATCGTGTTGATGACATTGTTCAAACAAGTTTACATTTTTCTGATTCATCACATGTTTTGAATCAAAATCAAAACATTTTTCCTAATTGGGTTGTGCCTCAAAATCAAATCAATAGCAACAACAATAACAACCCTTCAGTTTCATCGGTTAATTTACCTTCACAACAAGATCAACAACATCAAGAACATCATCAAGAAGATCTTGCACCTGCAAGAACAACAGAAACTACTTCTGCTGAGTTGGCACTAACAAGAAAGAAGAAAGAGGAGATTAAAGAACAGAAGAAGAAAGATGAAGAAGGTTTACACCTTCTAACACTACTTCTCCAATGTGCAGAAGCTGTATCAGCAGAGAATCTAGAACAAGCAAACAAGATGTTACTCGAGATTTCGCAGCTCTCGACGCCTTTCGGTACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCAATTTCAGCAAGACTAGTGAGTTCATGTTTAGGAATCTACACAACACTTCCACCACACATTACACCACATAATCAAAAAGTTGCTTCAGCTTTTCAAGTATTCAATGGAATTAGCCCATTTGTGAAATTCTCTCATTTCACTGCTAATCAAGCTATACAAGAAGCATTTGAAAGAGAAGAAAGAGTTCACATAATAGATCTTGATATAATGCAAGGTTTACAATGGCCTGGTTTGTTTCATATTCTTGCTTCGAGACCCGGTGGACCGCCTTATGTGAGACTCACTGGTTTAGGTACTTCCATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGATTTTGCATCTAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAGAAAGTTGGAAACATTGATCCTGATAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACAGTAGTGGAACAAGACTTAAGCAATGCAGGTTCATTTTTAGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCACTATTTGATTCTCTTGGTTCAAGCTATGGTGAAGAGAGTGAAGAGAGACATGTCGTGGAGCAACAGCTATTATCACGGGAGATTCGTAATGTACTTGCAGTTGGAGGACCATCAAGGAGTGGTGAAATAAAGTTTCATAATTGGAGAGAAAAACTTCAACAGTGTGGTTTTAGAGGTATCTCTTTGGCTGGTAATGCTGCTACTCAAGCTAGTCTTCTTCTTGGCATGTTCCCTTCTGAAGGGTATACTTTAGTTGAGGATAATGGTATCCTAAAACTTGGTTGGAAAGATCTTTGTTTACTTACTGCTTCTGCTTGGAGACCTCCTTTTCATACCAATAATGTCATTCCACATCATAACTAA 2493 0.3638 MAACALFNGGGNSDETNLSNNNNNSTASNSSNISSEDLHHNMLQTQPHHSERKLLRKRMASEMELQLHNNNNSSSDNYHRFPRRNNNNNISSLNCSLPSATQKGVTTTTTTTTTTLLAAGTNNSTSTNNNNYHYHNNNINNNNNSNVALSRDNVCIQNYPTVSVTTNYSTMLLPSSSSNNLNNSSNSASNYTHFQQPLVEEQNNPLPSICGFSGLPLFPSQNQTNNNNRNNGSSNIITCAAANIVDVVSPSMMEETSATTNWIDGILKDLIHTSNSVSISQLINNVREIIYPCNPNLALVLEHRLRLLTETIPQNCSSSVVTERKRNNTEQQQQQSVVNVNVLAAPNVNSSVKLMNRVDDIVQTSLHFSDSSHVLNQNQNIFPNWVVPQNQINSNNNNNPSVSSVNLPSQQDQQHQEHHQEDLAPARTTETTSAELALTRKKKEEIKEQKKKDEEGLHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYTTLPPHITPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFASKLGLPFEFFPVAEKVGNIDPDKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNNVIPHHN* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2077 830 MobiDBLite consensus disorder prediction 401 433 - -
Tpr6g2077 830 ProSiteProfiles GRAS family profile. 450 817 IPR005202 -
Tpr6g2077 830 Pfam GRAS domain family 460 817 IPR005202 -
Tpr6g2077 830 PANTHER PROTEIN SCARECROW 177 819 - -
Tpr6g2077 830 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 819 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2077 Tpr-Chr6 22504750 22508803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2077 425 818 GRAS Transcription Factor Family AT3G54220 83.333 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr6g2077 GRAS 5.8e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2077 - - gmx:100806779 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0735 4 6857473 6860079 Tpr6g2077 6 22504750 22508803 PCT