Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2075 ATGGCTGAGGGAAAAGGAAGGGTTTGTGTGACTGGAGGAACAGGTTTTCTTGGTTCATGGATCATCAAGAGTCTTCTTGAAAATGGATACTCTGTTAATACCACTATTAGAGCTGATCCAGGACGTAAGAGGGATGTCAGCTTCCTAACAAATCTACCCGGCGCATCCGAAAGGCTACATTTCTTCAATGCCGATCTAAGCGATCCAGACAGTTTCACCGCAGCAGTCGAAGGTTGTGTCGGGATATTCCACACTGCTTCACCAATCGATTTCGCGGTGAGTGAGCCAGAAGAAATAGTGACAAAAAGAACAGTGGATGGAGCATTAGGAATTTTAAAAGCATGTGTGAATTCAAAGACAGTGAAGAGATTTATTTACACTTCAAGTGGTTCTGCTGTTTCATTCAATGGTAAAGACAAAGATGTGTTGGATGAAAGTGATTGGAGTGATGTTGATTTGCTTAGAAGTGTTAAACCATTTGGTTGGAATTATGGTGTTTCAAAAACTTTGGCTGAGAAAGCAGTGCTTGAATTTGGTGAACAAAATGGGATTGATGTTGTTACTTTGATTCTTCCTTTTATTGTTGGTGGTTTTGTTTGTCCTAAGCTTCCTGATTCTGTTGAGAAAGCTCTTGTTTTGGTACTAGGCAAAAAGGAACAAATTGGTATTACACGTTTCCACATGGTACATGTGGATGATGTGGCTAGAGCACATATATATCTACTTGAGAATTCTGTTCCAGGAGGAAGATATAATTGTTCACCATTCATTGTATCTATTGAAGAAATGTCTCAACTTCTTTCAGCCAAATATCCAGAATATCAAATACTAACAGTAGATGAGTTGAAGGAAATTAAAGGTGCAAGGTTACCAGATTTGAACACGAAGAAACTCGTGGACGCTGGTTTTGAGTTTAAGTACAGTGTTGATGATATGTTCGACGATGCTATTCAATGTTGCAAGGAAAAAGGCTATCTCTAA 981 0.3914 MAEGKGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPGRKRDVSFLTNLPGASERLHFFNADLSDPDSFTAAVEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYGVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGGFVCPKLPDSVEKALVLVLGKKEQIGITRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVSIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFEFKYSVDDMFDDAIQCCKEKGYL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2075 326 Gene3D - 5 326 - -
Tpr6g2075 326 CDD FR_SDR_e 8 303 - -
Tpr6g2075 326 Pfam NAD dependent epimerase/dehydratase family 8 253 IPR001509 -
Tpr6g2075 326 PANTHER DIHYDROFLAVONOL 4-REDUCTASE-LIKE PROTEIN 1 318 - -
Tpr6g2075 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 321 IPR036291 -
Tpr6g2075 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2075 Tpr-Chr6 22469339 22472119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2075 4 326 Monolignol Biosynthesis Gene Families AT2G02400 36.086 3.96e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2075 - K13265 ag:AAB41550 634.795