Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2070 ATGGAAGGGAGAGAAGGTAACAACTCAGGGGTAACAGTGATAGGAGCAGAAGCTCCATCAACTTATCATATGGCACCAAGGAGTGAAGCTCCAACTCAACATGGTGCTGTTCCTGAATCAGGAAGTGGAGCTATCGGTGTCTCACCGGTGAATGTAGGATTGGATGGAGGAACAATTAAGAAGAAAAGAGGTAGGCCAAGGAAATATGGGCCAGATGGGTCGGTTGCTGCTGTGGCGTTGTCCCCGTTGCCAATCTCATCTTCAGCTGCTTTTGTTAATGAATTTTCAACCGCGAAGCAGGGGAAACCGAAGGGAATGGAGTTTAAGCAGTCGAAAAAAGGTGGAGTTGATCCTCTAGGTGACTCGGTTGGTACCAACTTTATGCCGCATATCATTACCGTCAATGCTGGCGAGGACATTACAATGAAAGTTATATCTTTTTCGCAACAAGGACCACGAGCTATATGCATCCTATCTGCTAGTGGCGTGATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGCGGTACTTTGACCTATGAGGGCCGTTTTGAGATACTCTCGCTATCTGGATCATTCATGCCTACTGAGAGCCAAGGAACAATAAGCCGGTCCGGTGGAATGAGTGTTTCTTTGTCAAGCCCTGATGGCCGTGTTGTAGGTGGTGGAGTTGCCGGTCTTCTTGTCGCTGCCACTCCTGTGCAGGTGGTGGTTGGAAGTTTTCTGCCAAGTAACCAACAAGACCAGAAAACGAAGAAGCCAAAATCTGATTATGCAACAGCTACCGTTACCGCACCTATTCCAGTGTCTTCGGAACCACCTTCAACCAATGGTGAAAGGATAGATGTCATGTGTGGACACCCAATGCAAAATTCCGGAACATTTAACTCGAACTTTACTCCTCCCTCGGCCTTTCGCAGAGAAAACTGGGCTAACATGCACTCCATGCCGGACTCAATGAAGTCTGCAACTGATATTAACATATCTTTGCCTGATAATTAA 1005 0.4687 MEGREGNNSGVTVIGAEAPSTYHMAPRSEAPTQHGAVPESGSGAIGVSPVNVGLDGGTIKKKRGRPRKYGPDGSVAAVALSPLPISSSAAFVNEFSTAKQGKPKGMEFKQSKKGGVDPLGDSVGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTISRSGGMSVSLSSPDGRVVGGGVAGLLVAATPVQVVVGSFLPSNQQDQKTKKPKSDYATATVTAPIPVSSEPPSTNGERIDVMCGHPMQNSGTFNSNFTPPSAFRRENWANMHSMPDSMKSATDINISLPDN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2070 334 CDD DUF296 129 242 IPR005175 -
Tpr6g2070 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Tpr6g2070 334 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 333 - -
Tpr6g2070 334 Gene3D - 129 262 - -
Tpr6g2070 334 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Tpr6g2070 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 333 IPR039605 GO:0003680
Tpr6g2070 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 246 - -
Tpr6g2070 334 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2070 Tpr-Chr6 22379720 22384366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2070 6 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.285 2.33e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2070 - - gmx:100777213 486.878