Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2050 ATGGAGTACCAAATATTTCTAATATTGATTAGTTTTATGTGTGCAAGCATTTTCATCTTCATTTTTAGAAAATTAAACCAAACTCAAAAATCTACAAATCTTCTTCCACCAGGGCCACGCCCATTTCCCATCATTGGAAACATTTTAGAACTTGGCAAAAACCCACACAAGACACTCACAAAACTCTCTCAAATCTATGGACCAATCATGACACTTAAACTAGGAACCATAACAACCATAGTAATCTCATCACCACAACTAGCCAAACAAGTCTTACATGAAAATTCACAAATCTTCTCTAATAGAACTGTCCCACATGCACTTTGTGCACTTAATCATGACAAAGTCTCAGTTGGAATGCTTCCACCATTAGCTTTATGGAAGAAACTAAGAAAAATTTGTGCTACAAAAGTATTTTCTACAAATATTCTTGACTCAACAAAAATTCTCCGCCAACAAAAGTTGCAAGAATTATTGGATTATGTGAAGGAAAAATGTAACAAAGGTGAAGTTTTTGATGTTGGTGAGGTTGTTTTTACAACTATCCTTAATTCAATTTCAAATATTTTGTTCTCTATGGATTTGACTCATTCCACACCTGATGAAAAGTCTCAAGAGTTTAAAAACATTATTTGGGGAATCATGGAAGAATCTGGTAGGCCTAATGTTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAAGGGTAAAAGCAAGGATGACCAATCATATGAAAAAGGTGTATAAGATTTTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGATTCCAAAGTTGATTATGAGGTGTTCAATGATGTGTTAGATTCACTTCTTAATAACAACAATCTTGGAGAAACCACTTCTGAATTGAGCCGCAATGAGATGGTGCATCTATTTCAGGATTTATTTGTTGCCGGGACAGATACTACATCAAGCACCATTGAATGGATTATGGCAGAGCTACTACGTAATCCTGAAAAATTAACAAAAGCAAGAAAAGAATTATGTAAAGCAATTGGCAAAGACGAAACAATTGAAGAATCACATATATCAAAGTTACCTTTCTTACAAGCAGTGGTGAAGGAAACATTGAGATTGCACCCGGCTGCTCCATTATTGCTACCACACAAATGTGATGAAAATATGAACATATTAGGCTTCAATGTGCCAAAAAATGCACAATTATTTGTCAATGTGTGGGCAATGGGAAGAGATCCAACCATTTGGGAAAATCCAACTATGTTCATGCCTGAAAGATTTTTGGAGTGTGATATTAATTATAAGGGTAATAATTTTGAGCTTATACCTTTTGGAGCTGGCAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTATGCATTTGATTGTGGCATCCCTTCTACGCAACTTTGAATGGACACTTGCTGATGGGCTAAAGCCAGAAGACATGAATATGGATGAGCAATTTGGGTTAACCCTGAAGAGAATCAAAGCTCTTCGAGTTCAAGCTACTTCATCACCATAG 1518 0.3551 MEYQIFLILISFMCASIFIFIFRKLNQTQKSTNLLPPGPRPFPIIGNILELGKNPHKTLTKLSQIYGPIMTLKLGTITTIVISSPQLAKQVLHENSQIFSNRTVPHALCALNHDKVSVGMLPPLALWKKLRKICATKVFSTNILDSTKILRQQKLQELLDYVKEKCNKGEVFDVGEVVFTTILNSISNILFSMDLTHSTPDEKSQEFKNIIWGIMEESGRPNVSDFFPILRPLDPQRVKARMTNHMKKVYKIFDGIIEERICSRDSKVDYEVFNDVLDSLLNNNNLGETTSELSRNEMVHLFQDLFVAGTDTTSSTIEWIMAELLRNPEKLTKARKELCKAIGKDETIEESHISKLPFLQAVVKETLRLHPAAPLLLPHKCDENMNILGFNVPKNAQLFVNVWAMGRDPTIWENPTMFMPERFLECDINYKGNNFELIPFGAGKRICPGLPLAHRTMHLIVASLLRNFEWTLADGLKPEDMNMDEQFGLTLKRIKALRVQATSSP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2050 505 Gene3D Cytochrome P450 20 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 504 - -
Tpr6g2050 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 504 - -
Tpr6g2050 505 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2050 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2050 Tpr-Chr6 22140957 22143049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2050 4 497 Cytochrome P450 AT2G45550 45.875 3.13e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2050 - - gmx:100809461 687.567