Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2043 ATGGAGTACCAAACACTTTTGCTAGTGATTACCTTCCTAAGTGCAAGCATTCTCATCTTCATTCTTAGAAAATTAAACCAAACCCAAAATCCTACAAAGCTTCCACCAGGGCCATACCCACTTCCCATTTTAGGAAACATTTTAGAACTTGGCAAAAACCCACACAAGACACTCACAAAACTCTCTAAAATCTATGGACCAATCATGACACTTAAACTAGGAACCATAACAACCATAGTAATCTCATCACCACAACTAACCAAACAAGTCTTACATGAAAATTGCCAAATCTTTTCTAATAGAACTGTCCCACATGCAATTTGTGCGGTAGATCATAACAAATTTTCAGTTGGGTGGGTTCCAACTTTAGCTTTGTGGAAGAAACTAAGAAAAATTTGTGCTACCAAAGTATTTTCTACAAAAATGTTAGACTCAACAAAAATCCTTCGCCAACAAAAATTGCATGAATTATTGGACTATGTGAATGAAAAATGTAAGAAATGTGAAGTTTTTGATATTGGTGAGGTTGTTTTTACAACTGTCCTTAATTCAATTTCAAAAACTTTGTTCTCTATGGATTTGGCTCATTCCACACCTGATGAAAAGTCTCAAGAGTTTAAAAACATTATTTGGGGTTACATGGTTGAAGCTGGTAGGCCTAATGTTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAAGGGTAAAAGCAAGGATGGCCAATCATATGAAAAAGGTGTATAAGATTTTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGATTCCAAAGCTGATTATGAGGTGTGCAATGATGTGTTAGATTCACTTCTTAATAACAACAATCTTGGAGAACCCACTTCTAAATTGAGCCACAATGAAATGGTGCATCTATTTCTGGATTTATTTGTTGCTGGGGTTGACACTACATCAAGCACCATTGAATGGATTATGGCGGAGCTACTACGTTACCCGAAAACATTAACAAAAGCAAGAAAAGAATTATGTAAAGCAATCGGCAAAGATGAAATAATTGAAGAATCACATATTTCTAAGTTGCCTTTCTTACAAGCAGTGGTGAAGGAAACATTGAGATTGCACCCAGCTGCTCCATTTTTGCTACCACACAAATGTGATGAAAATATGAACATATTAGGCTTCAATGTGCCAAAAAATGCACAATTATTTGTCAATGTGTGGGCAATGGGAAGAGATCCAACCATTTGGGAAAATCCAACTATGTTCATGCCTGAAAGATTTTTGGAGTGTGATATTAATTATAAGGGTAATAATTTTGAGCTTATACCCTTTGGGGTTGGCAAGAGAATTTGTCCAGGATTGCCCTTAGCTCATAGGACTATGCATTTGGTTGTAGCATCCCTTCTACGCAACTTTGAATGA 1407 0.3596 MEYQTLLLVITFLSASILIFILRKLNQTQNPTKLPPGPYPLPILGNILELGKNPHKTLTKLSKIYGPIMTLKLGTITTIVISSPQLTKQVLHENCQIFSNRTVPHAICAVDHNKFSVGWVPTLALWKKLRKICATKVFSTKMLDSTKILRQQKLHELLDYVNEKCKKCEVFDIGEVVFTTVLNSISKTLFSMDLAHSTPDEKSQEFKNIIWGYMVEAGRPNVSDFFPILRPLDPQRVKARMANHMKKVYKIFDGIIEERICSRDSKADYEVCNDVLDSLLNNNNLGEPTSKLSHNEMVHLFLDLFVAGVDTTSSTIEWIMAELLRYPKTLTKARKELCKAIGKDEIIEESHISKLPFLQAVVKETLRLHPAAPFLLPHKCDENMNILGFNVPKNAQLFVNVWAMGRDPTIWENPTMFMPERFLECDINYKGNNFELIPFGVGKRICPGLPLAHRTMHLVVASLLRNFE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2043 468 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS E-class P450 group I signature 446 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tpr6g2043 468 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 SUPERFAMILY Cytochrome P450 35 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 468 - -
Tpr6g2043 468 Gene3D Cytochrome P450 20 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 Pfam Cytochrome P450 35 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2043 468 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2043 Tpr-Chr6 22042526 22045866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2043 4 468 Cytochrome P450 AT2G45550 46.383 1.79e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2043 - - gmx:100810526 636.721