Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2040 ATGGAGTACCAAACACTTTTGCTAGTGATTACCTTCCTAAGTGCAAGCATTCTCATCTTCATTCTTAGAAAAATAAACCAAACCCAAAATCCTACAAAGCTTCCACCAGGGCCATACCCACTTCCCATTTTAGGAAACATCTTAGAACTTGGCAAAAACCCACACAAGACCCTCACAAAACTCAATAAAATCTATGGACCAATCATGACACTTAAACTAGGAACCATAACAACCATAGTAATCTCATCACCACAACTAACCAAACAAGTCTTACATGAAAATTGCCAAATCTTTTCTAATAGAACTGTCCCACATGCAATTTGTGCAGTAGATCATAACAAATTCTCAGTTGGGTGGGTTCCAACATTAGCTTTGTGGAAGAAACTAAGAAAAATTTGTGCTACCAAAGTATTTTCTACAAAAATGTTAGACTCAACAAAAATCCTTCGCCAACAAAAATTGCATGAATTATTGGATTATGTGAATGAAAAATGTAAGAAATGTGAAGTTTTTGATATTGGTGAGGTTGTTTTTACAACTGTCCTTAATTCAATTTCAAAAACTTTGTTCTCTATGGATTTGGCTCATTCCACACCTGATGAAAAGTCTCAAGAGTTTAAAAACATTATTTGGGGTTACATGGTTGAAGCTGGTAGGCCTAATGTTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAAGGGTAAAAGCAAGGATGGCCAATCATATGAAGAAGGTGTATAAGATTTTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGATTCCAAAGCTGATTATGAGGTGTGCAATGATGTGTTAGATTCACTTCTTAATAACAACAATCTTGGAGAACCCACTTCTAAATTGAGCCACAATGAAATGGTGCATCTATTTCTGGATTTATTTGTTGCTGGGGTTGACACTACATCAAGCACCATTGAATGGATTATGGCGGAGCTACTACGTTACCCGAAAACATTAACAAAAGCAAGAAAAGAATTATGTAAAGCAATCGGCAAAGATGAAATAATTGAAGAATCACATATTTCTAAGTTGCCTTTCTTACAAGCAGTGGTGAAGGAAACGTTGAGATTGCACCCAGCTGCTCCATTTTTGCTACCACACAAATGTGATGAAAATATGAACATATTAGGCTTCAATGTGCCAAAAAATGCACAATTATTTGTCAATGTGTGGGCAATGGGAAGAGATCCAACCATTTGGGAAAATCCAACTATGTTCATGCCTGAAAGATTTTTGGAGTGTGATATTAATTATAAGGGTAATAATTTTGAGCTTATACCCTTTGGGGTTGGCAAGAGAATTTGTCCAGGATTGCCCTTAGCTCATAGGACTGTGCATTTGGTTGTAGCATCCCTTCTACGCAACTTTGAATGGACACTTGCTGATGGGCTAAACCCAGAAGACATGAATATGGATGAGCAATTTGGGATAACCCTAAAGAGGGCCCAATCTCTTCGAGTTCAAGCTACTTCATCGGCATAG 1515 0.369 MEYQTLLLVITFLSASILIFILRKINQTQNPTKLPPGPYPLPILGNILELGKNPHKTLTKLNKIYGPIMTLKLGTITTIVISSPQLTKQVLHENCQIFSNRTVPHAICAVDHNKFSVGWVPTLALWKKLRKICATKVFSTKMLDSTKILRQQKLHELLDYVNEKCKKCEVFDIGEVVFTTVLNSISKTLFSMDLAHSTPDEKSQEFKNIIWGYMVEAGRPNVSDFFPILRPLDPQRVKARMANHMKKVYKIFDGIIEERICSRDSKADYEVCNDVLDSLLNNNNLGEPTSKLSHNEMVHLFLDLFVAGVDTTSSTIEWIMAELLRYPKTLTKARKELCKAIGKDEIIEESHISKLPFLQAVVKETLRLHPAAPFLLPHKCDENMNILGFNVPKNAQLFVNVWAMGRDPTIWENPTMFMPERFLECDINYKGNNFELIPFGVGKRICPGLPLAHRTVHLVVASLLRNFEWTLADGLNPEDMNMDEQFGITLKRAQSLRVQATSSA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2040 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tpr6g2040 504 Gene3D Cytochrome P450 20 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 503 - -
Tpr6g2040 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 503 - -
Tpr6g2040 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g2040 504 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2040 Tpr-Chr6 22032160 22035477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2040 4 496 Cytochrome P450 AT2G45550 46.988 1.98e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2040 - - gmx:100810526 679.478